RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
GABPB1-212ENST00000615671 EFCAB8A8MWE9 144 aa20.2■□□□□ 0.83
GABPB1-212ENST00000615671 KRT10P13645 584 aa20.2■□□□□ 0.83
GABPB1-212ENST00000615671 ADD2P35612 726 aa20.2■□□□□ 0.83
GABPB1-212ENST00000615671 WRNIP1Q96S55 665 aa20.2■□□□□ 0.83
GABPB1-212ENST00000615671 SUCLA2Q9P2R7 463 aaPredicted RBP20.2■□□□□ 0.83
GABPB1-212ENST00000615671 FRMD3A2A2Y4 597 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 LRRD1A4D1F6 860 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 ESRRBO95718 433 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 CDK8P49336 464 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 DCAF4L1Q3SXM0 396 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 KRT82Q9NSB4 513 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 CLTAP09496 248 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 UNC5CLQ8IV45 518 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 PIM2Q9P1W9 311 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 TLK1Q9UKI8 766 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 ATP10DQ9P241 1426 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 GOLGA8KD6RF30 607 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 ATICP31939 592 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 NOP14P78316 857 aaKnown RBP20.2■□□□□ 0.82
GABPB1-212ENST00000615671 ATP8A1Q9Y2Q0 1164 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 PLA2G4BP0C869 781 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 TCP11X2Q5H9J9 407 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 SUSD4Q5VX71 490 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 P2RX5Q93086 422 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 ANLNQ9NQW6 1124 aa20.2■□□□□ 0.82
GABPB1-212ENST00000615671 NPR1P16066 1061 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 ACCSLQ4AC99 568 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 TWF2Q6IBS0 349 aaKnown RBP20.19■□□□□ 0.82
GABPB1-212ENST00000615671 MAP3K21Q5TCX8 1036 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 TRIM67Q6ZTA4 783 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 TDRD3Q9H7E2 651 aaKnown RBP20.19■□□□□ 0.82
GABPB1-212ENST00000615671 NCF2P19878 526 aaPredicted RBP20.19■□□□□ 0.82
GABPB1-212ENST00000615671 ACBD5Q5T8D3 534 aaPredicted RBP20.19■□□□□ 0.82
GABPB1-212ENST00000615671 NUDCD1Q96RS6 583 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 TSPOAP1O95153 1857 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 EVI5O60447 810 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 FASTKD5Q7L8L6 764 aaKnown RBP20.19■□□□□ 0.82
GABPB1-212ENST00000615671 SLC35F6Q8N357 371 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 CPVLQ9H3G5 476 aa20.19■□□□□ 0.82
GABPB1-212ENST00000615671 XAB2Q9HCS7 855 aaKnown RBP20.19■□□□□ 0.82
GABPB1-212ENST00000615671 CPSF2Q9P2I0 782 aaKnown RBP20.19■□□□□ 0.82
GABPB1-212ENST00000615671 PPP6R3Q5H9R7 873 aaPredicted RBP20.18■□□□□ 0.82
GABPB1-212ENST00000615671 APOA5Q6Q788 366 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 CAPS2Q9BXY5 557 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 TMEM206Q9H813 350 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 SLMAPQ14BN4 828 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 ZMYM1Q5SVZ6 1142 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 PCGF5Q86SE9 256 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 ACRBPQ8NEB7 543 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 TM6SF1Q9BZW5 370 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 PARVGQ9HBI0 331 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 SARS2Q9NP81 518 aaKnown RBP20.18■□□□□ 0.82
GABPB1-212ENST00000615671 CFLARO15519 480 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 CYP2D6P10635 497 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 LCA5Q86VQ0 697 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 THEM5Q8N1Q8 247 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 BBOF1Q8ND07 529 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 USH1CQ9Y6N9 552 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 PI4K2BG5E9Z4 385 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 PLCG1P19174 1290 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 CACNB2Q08289 660 aaPredicted RBP20.18■□□□□ 0.82
GABPB1-212ENST00000615671 LRRC8AQ8IWT6 810 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 RTKN2Q8IZC4 609 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 AP1M1Q9BXS5 423 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 PNMA3Q9UL41 463 aa20.18■□□□□ 0.82
GABPB1-212ENST00000615671 ARAP3Q8WWN8 1544 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 SLFNL1Q499Z3 407 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 NLRP10Q86W26 655 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 SLC17A8Q8NDX2 589 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 INTUQ9ULD6 942 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 BLMP54132 1417 aaPredicted RBP20.17■□□□□ 0.82
GABPB1-212ENST00000615671 K7ERI5 159 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 BRD1O95696 1058 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 ARMCX2Q7L311 632 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 RBM46Q8TBY0 533 aaKnown RBP20.17■□□□□ 0.82
GABPB1-212ENST00000615671 OTUD5Q96G74 571 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.17■□□□□ 0.82
GABPB1-212ENST00000615671 EPB41L5Q9HCM4 733 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 CRKP46108 304 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 FRA10AC1Q70Z53 315 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 EMILIN3Q9NT22 766 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 PLS3P13797 630 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 HADHAP40939 763 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 GRAPQ13588 217 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 GRAPLQ8TC17 118 aaPredicted RBP20.17■□□□□ 0.82
GABPB1-212ENST00000615671 PIH1D3Q9NQM4 214 aaKnown RBP20.17■□□□□ 0.82
GABPB1-212ENST00000615671 SPTLC3Q9NUV7 552 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 MAN1B1Q9UKM7 699 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 TPX2Q9ULW0 747 aaKnown RBP20.17■□□□□ 0.82
GABPB1-212ENST00000615671 MYOM2P54296 1465 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 LSG1Q9H089 658 aaKnown RBP20.17■□□□□ 0.82
GABPB1-212ENST00000615671 ABCC4O15439 1325 aa20.17■□□□□ 0.82
GABPB1-212ENST00000615671 PDCD7Q8N8D1 485 aaKnown RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 NRBP1Q9UHY1 535 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 SLC13A4Q9UKG4 626 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 CREB3O43889 395 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 ECE2O60344 883 aa20.16■□□□□ 0.82
GABPB1-212ENST00000615671 SEC31AO94979 1220 aaKnown RBP20.16■□□□□ 0.82
GABPB1-212ENST00000615671 PSMA2P25787 234 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms