RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 KRT28Q7Z3Y7 464 aa1.89□□□□□ -2.11
BRCA2-207ENST00000614259 CCDC138Q96M89 665 aa1.89□□□□□ -2.11
BRCA2-207ENST00000614259 PDCD2LQ9BRP1 358 aa1.89□□□□□ -2.11
BRCA2-207ENST00000614259 RASSF4Q9H2L5 321 aa1.89□□□□□ -2.11
BRCA2-207ENST00000614259 VWA7Q9Y334 891 aa1.89□□□□□ -2.11
BRCA2-207ENST00000614259 POTEB2H3BUK9 544 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 KIF1CO43896 1103 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 BNIP3LO60238 219 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 TBCAO75347 108 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 EOMESO95936 686 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SCGB1D1O95968 90 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CD68P34810 354 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 GUCY1A3Q02108 690 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SOX4Q06945 474 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 TCF15Q12870 199 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PTK2BQ14289 1009 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 BAK1Q16611 211 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 C15orf59Q2T9L4 293 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 NOL9Q5SY16 702 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 GPAT2Q6NUI2 795 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 FAM35AQ86V20 835 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ZC3H7AQ8IWR0 971 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ACSF2Q96CM8 615 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PHTF1Q9UMS5 762 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 NEU2Q9Y3R4 380 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 TIAF1O95411 115 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SRFP11831 508 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 XBP1P17861 261 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CHMP24386 653 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 EEF1DP29692 281 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 IRS1P35568 1242 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 RAB27AP51159 221 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 NEK4P51957 841 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 GSTM4Q03013 218 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ARHGAP29Q52LW3 1261 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 NUTM2GQ5VZR2 741 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 OLFML2BQ68BL8 750 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 OVCH1Q7RTY7 1134 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 GFM2Q969S9 779 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 FAM162AQ96A26 154 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 RBM15Q96T37 977 aaKnown RBP eCLIP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ARPC5LQ9BPX5 153 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 LMAN2LQ9H0V9 348 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SLC12A5Q9H2X9 1139 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PIDD1Q9HB75 910 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SRP68Q9UHB9 627 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 A0A087X0M5 115 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 A0A1B0GX30 115 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 RASA4BC9J798 803 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 MTSS1O43312 755 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 RASA4O43374 803 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PLOD3O60568 738 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PEX14O75381 377 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 TSPAN9O75954 239 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 RPN1P04843 607 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 TARSP26639 723 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 KRT76Q01546 638 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 WDR45BQ5MNZ6 344 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 MRM1Q6IN84 353 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 NOSTRINQ8IVI9 506 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 C2orf69Q8N8R5 385 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SEC14L1Q92503 715 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 DDX11Q96FC9 970 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CCDC68Q9H2F9 335 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 AXIN1O15169 862 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PHGDHO43175 533 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CKMP06732 381 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PAPOLAP51003 745 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ALDH5A1P51649 535 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CHRNEQ04844 493 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CCDC6Q16204 474 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 TWISTNBQ3B726 338 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SPOUT1Q5T280 376 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 JAKMIP3Q5VZ66 844 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 B3GNT9Q6UX72 402 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SPATC1Q76KD6 591 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ADGRA1Q86SQ6 560 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ULK2Q8IYT8 1036 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PHACTR4Q8IZ21 702 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SLC7A14Q8TBB6 771 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CASKIN2Q8WXE0 1202 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 AUTS2Q8WXX7 1259 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 RPGRQ92834 1020 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 MVB12AQ96EY5 273 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 DPH1Q9BZG8 443 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 CRTAC1Q9NQ79 661 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ZIM2Q9NZV7 527 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 MARCH4Q9P2E8 410 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 DKK3Q9UBP4 350 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 NUDT5Q9UKK9 219 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 G3BP2Q9UN86 482 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 GPR45Q9Y5Y3 372 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 FRMPD2Q68DX3 1309 aaPredicted RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ZNF862O60290 1169 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PSMA3P25788 255 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ALDH9A1P49189 494 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 PCBP3P57721 371 aaKnown RBP1.88□□□□□ -2.11
BRCA2-207ENST00000614259 ST5P78524 1137 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 SLC4A8Q2Y0W8 1093 aa1.88□□□□□ -2.11
BRCA2-207ENST00000614259 FBXO47Q5MNV8 452 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms