RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 CERKLQ49MI3 558 aaPredicted RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 EMC10Q5UCC4 262 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 CENPPQ6IPU0 288 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 TATDN1Q6P1N9 297 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 KRT26Q7Z3Y9 468 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 C1orf131Q8NDD1 294 aaKnown RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 NUCKS1Q9H1E3 243 aaKnown RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 ZNF70Q9UC06 446 aaPredicted RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 BCS1LQ9Y276 419 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 SIK3Q9Y2K2 1263 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 SRRM3A6NNA2 597 aaPredicted RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 NDUFAB1O14561 156 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 CYTH3O43739 400 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 KIAA0754O94854 1291 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 GOLGA8HP0CJ92 632 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 VEGFAP15692 232 aaPredicted RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 EIF4A3P38919 411 aaKnown RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 TNIP1Q15025 636 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 SKIDA1Q1XH10 827 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 ASPRV1Q53RT3 343 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 FOXR2Q6PJQ5 311 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 USP17L2Q6R6M4 530 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 KDM7AQ6ZMT4 941 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 KRT25Q7Z3Z0 450 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 CD302Q8IX05 232 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 MREGQ8N565 214 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATF3-211ENST00000613954 GPKOWQ92917 476 aaPredicted RBP eCLIP12.35□□□□□ -0.438e-6■■□□□ 13.6
ATF3-211ENST00000613954 CALML4Q96GE6 196 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 MLXIPQ9HAP2 919 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 BARHL2Q9NY43 387 aa12.35□□□□□ -0.43
ATF3-211ENST00000613954 BAZ2BQ9UIF8 2168 aaKnown RBP12.35□□□□□ -0.43
ATF3-211ENST00000613954 PVALEFA0A1B0GWK0 134 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 GRID2IPA4D2P6 1211 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 PLEKP08567 350 aaPredicted RBP12.34□□□□□ -0.43
ATF3-211ENST00000613954 SNHG28P0DPA3 235 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 PDHBP11177 359 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 MATR3P43243 847 aaKnown RBP eCLIP12.34□□□□□ -0.43
ATF3-211ENST00000613954 LIG3P49916 1009 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 MMP14P50281 582 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
ATF3-211ENST00000613954 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 TTMPQ5BVD1 217 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 CFAP58Q5T655 872 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 FKBP1CQ5VVH2 108 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 LRRC47Q8N1G4 583 aaKnown RBP12.34□□□□□ -0.43
ATF3-211ENST00000613954 RASGRP4Q8TDF6 673 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 DRC1Q96MC2 740 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 PLIN2Q99541 437 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 PAGR1Q9BTK6 254 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 GDF3Q9NR23 364 aa12.34□□□□□ -0.43
ATF3-211ENST00000613954 CLRN2A0PK11 232 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 FAM196BA6NMK8 535 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 TCP10L2B9ZVM9 353 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 SETQ01105 290 aaPredicted RBP12.33□□□□□ -0.43
ATF3-211ENST00000613954 SLC7A5Q01650 507 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 YTHDF3Q7Z739 585 aaKnown RBP12.33□□□□□ -0.43
ATF3-211ENST00000613954 CLEC10AQ8IUN9 316 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.43
ATF3-211ENST00000613954 FAM151AQ8WW52 585 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 ZIM3Q96PE6 472 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 CSRNP1Q96S65 589 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 NYAP2Q9P242 653 aa12.33□□□□□ -0.43
ATF3-211ENST00000613954 MYH10P35580 1976 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 LRRC53A6NM62 1247 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 RBAK-RBAKDNI3L0D1 243 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 STXBP3O00186 592 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 SLURP2P0DP57 97 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 FCER1AP12319 257 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 NONOQ15233 471 aaKnown RBP eCLIP12.33□□□□□ -0.443e-6■■□□□ 13.1
ATF3-211ENST00000613954 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.33□□□□□ -0.44
ATF3-211ENST00000613954 TMEM179Q6ZVK1 233 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 UNC13DQ70J99 1090 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 SV2BQ7L1I2 683 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 RRAGAQ7L523 313 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 CACNA2D4Q7Z3S7 1137 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 HEATR3Q7Z4Q2 680 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 CNPY4Q8N129 248 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.44
ATF3-211ENST00000613954 WHAMMQ8TF30 809 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 SYN2Q92777 582 aaPredicted RBP12.33□□□□□ -0.44
ATF3-211ENST00000613954 ARL8AQ96BM9 186 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 ZBED3Q96IU2 234 aaPredicted RBP12.33□□□□□ -0.44
ATF3-211ENST00000613954 NCAPGQ9BPX3 1015 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 TLR10Q9BXR5 811 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 LRRC27Q9C0I9 530 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 SEMA6BQ9H3T3 888 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 KANSL2Q9H9L4 492 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 FAM207AQ9NSI2 230 aaPredicted RBP12.33□□□□□ -0.44
ATF3-211ENST00000613954 STK17AQ9UEE5 414 aa12.33□□□□□ -0.44
ATF3-211ENST00000613954 HERC5Q9UII4 1024 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms