RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 LRRC15Q8TF66 581 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 OPTNQ96CV9 577 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 TRIM44Q96DX7 344 aaPredicted RBP9.99□□□□□ -0.81
CCDC47-207ENST00000612558 C7orf25Q9BPX7 421 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 NUDT12Q9BQG2 462 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 MXRA8Q9BRK3 442 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 LRRC27Q9C0I9 530 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 RRAGCQ9HB90 399 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 FRMPD4Q14CM0 1322 aa9.99□□□□□ -0.81
CCDC47-207ENST00000612558 BCRP11274 1271 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 ERCC5P28715 1186 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-207ENST00000612558 CCT6AP40227 531 aaKnown RBP9.98□□□□□ -0.81
CCDC47-207ENST00000612558 FKBP1BP68106 108 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 MYL5Q02045 173 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 PLS1Q14651 629 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 KCNB1Q14721 858 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 NCAPHQ15003 741 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 SPRYD7Q5W111 196 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 PCNX4Q63HM2 1172 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 SARM1Q6SZW1 724 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 LBX2Q6XYB7 198 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 FASTKD5Q7L8L6 764 aaKnown RBP9.98□□□□□ -0.81
CCDC47-207ENST00000612558 LARP4BQ92615 738 aaKnown RBP9.98□□□□□ -0.81
CCDC47-207ENST00000612558 RAD54LQ92698 747 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 SLC5A5Q92911 643 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 ZNF775Q96BV0 537 aaPredicted RBP9.98□□□□□ -0.81
CCDC47-207ENST00000612558 SLC10A4Q96EP9 437 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 TAAR1Q96RJ0 339 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 UIMC1Q96RL1 719 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 TRIM5Q9C035 493 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 ACAD9Q9H845 621 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 BLOC1S4Q9NUP1 217 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 AGTPBP1Q9UPW5 1226 aa9.98□□□□□ -0.81
CCDC47-207ENST00000612558 TRAF5O00463 557 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PSMD10O75832 226 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 IRX3P78415 501 aaPredicted RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PRR20EP86478 221 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PRR20CP86479 221 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PRR20DP86480 221 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PRR20BP86481 221 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PRR20AP86496 221 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PABPC4Q13310 644 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 BAATQ14032 418 aaPredicted RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PGM5Q15124 567 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ECM1Q16610 540 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ZNF658Q5TYW1 1059 aaPredicted RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 LRCH2Q5VUJ6 765 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 NCAPH2Q6IBW4 605 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 XRRA1Q6P2D8 792 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 SLC30A10Q6XR72 485 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 OTOP1Q7RTM1 612 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 KCTD17Q8N5Z5 321 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ENOX1Q8TC92 643 aaKnown RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 CCDC47Q96A33 483 aaKnown RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 RMDN3Q96TC7 470 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 GTPBP4Q9BZE4 634 aaKnown RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 WDR11Q9BZH6 1224 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 TRIM9Q9C026 710 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ZNF408Q9H9D4 720 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PXMP2Q9NR77 195 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 VAV3Q9UKW4 847 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 RBBP6Q7Z6E9 1792 aaKnown RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 KLRC4O43908 158 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 RHOBTB3O94955 611 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ARP10275 920 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ITGB5P18084 799 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 EIF2AK2P19525 551 aaKnown RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 RPA1P27694 616 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ZNF75DP51815 510 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PPP2R5CQ13362 524 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 SNAPC2Q13487 334 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 MOGSQ13724 837 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 MCM6Q14566 821 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 HS1BP3Q53T59 392 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ARHGEF16Q5VV41 709 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 CNNM4Q6P4Q7 775 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 CATSPER3Q86XQ3 398 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 RIT2Q99578 217 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PDCD2LQ9BRP1 358 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ZNF577Q9BSK1 485 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 POLR3CQ9BUI4 534 aaPredicted RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 ASCC2Q9H1I8 757 aaPredicted RBP9.97□□□□□ -0.81
CCDC47-207ENST00000612558 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 JADE2Q9NQC1 790 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 CYP39A1Q9NYL5 469 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 FBXO40Q9UH90 709 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 KIAA1024Q9UPX6 916 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 UBIAD1Q9Y5Z9 338 aa9.97□□□□□ -0.81
CCDC47-207ENST00000612558 PVALEFA0A1B0GWK0 134 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 MYMKA6NI61 221 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 IPO5O00410 1097 aaKnown RBP9.96□□□□□ -0.82
CCDC47-207ENST00000612558 GAS7O60861 476 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 MED24O75448 989 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 SPATA31C1P0DKV0 1188 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 HERVK_113P62684 666 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 ASIC1P78348 528 aa9.96□□□□□ -0.82
CCDC47-207ENST00000612558 MRPS9P82933 396 aaKnown RBP9.96□□□□□ -0.82
CCDC47-207ENST00000612558 DHX8Q14562 1220 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms