RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 H3BQF6 201 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.2
CDH1-213ENST00000612417 LCA5LO95447 670 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 STAT2P52630 851 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 CKAP4Q07065 602 aaKnown RBP16.27■□□□□ 0.2
CDH1-213ENST00000612417 USH1GQ495M9 461 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 PRAMEF18Q5VWM3 479 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 KRT79Q5XKE5 535 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 FBXO11Q86XK2 927 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 PCMTD1Q96MG8 357 aaPredicted RBP16.27■□□□□ 0.2
CDH1-213ENST00000612417 ZNF341Q9BYN7 854 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 GLIS2Q9BZE0 524 aaPredicted RBP16.27■□□□□ 0.2
CDH1-213ENST00000612417 ZCCHC17Q9NP64 241 aaKnown RBP16.27■□□□□ 0.2
CDH1-213ENST00000612417 TMEM51Q9NW97 253 aa16.27■□□□□ 0.2
CDH1-213ENST00000612417 ENC1O14682 589 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 NKRFO15226 690 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDH1-213ENST00000612417 DDNO94850 711 aaPredicted RBP16.26■□□□□ 0.19
CDH1-213ENST00000612417 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
CDH1-213ENST00000612417 MCM3P25205 808 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 USP14P54578 494 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 DCAF15Q66K64 600 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 LRRC55Q6ZSA7 311 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 SNX29Q8TEQ0 813 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 VCPKMTQ9H867 229 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 PSD3Q9NYI0 1048 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 TFR2Q9UP52 801 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 MYH10P35580 1976 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 TARSL2A2RTX5 802 aaKnown RBP16.26■□□□□ 0.19
CDH1-213ENST00000612417 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDH1-213ENST00000612417 KIF5AQ12840 1032 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 HYIQ5T013 277 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 BTNL9Q6UXG8 535 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 DDX12PQ92771 950 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 CCDC42Q96M95 316 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 GGA3Q9NZ52 723 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 PRR12Q9ULL5 1215 aa16.26■□□□□ 0.19
CDH1-213ENST00000612417 ZNF263O14978 683 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 CTNND1O60716 968 aaKnown RBP16.25■□□□□ 0.19
CDH1-213ENST00000612417 TXLNBQ8N3L3 684 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 CHURC1Q8WUH1 139 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 EXOC4Q96A65 974 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 MMS19Q96T76 1030 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 EDEM3Q9BZQ6 932 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 SLC26A4O43511 780 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 CASP8Q14790 479 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 SPA17Q15506 151 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 KCNK18Q7Z418 384 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 HAS1Q92839 578 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 NAP1L4Q99733 375 aaKnown RBP16.25■□□□□ 0.19
CDH1-213ENST00000612417 PDE11AQ9HCR9 933 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 ARHGAP20Q9P2F6 1191 aa16.25■□□□□ 0.19
CDH1-213ENST00000612417 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 HIRAP54198 1017 aaPredicted RBP16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 ZCWPW2Q504Y3 356 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 USP17L6PQ6QN14 398 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 TRIM58Q8NG06 486 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
CDH1-213ENST00000612417 DNAJC19Q96DA6 116 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 CALCOCO1Q9P1Z2 691 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 DDX25Q9UHL0 483 aaKnown RBP16.24■□□□□ 0.19
CDH1-213ENST00000612417 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 KDM3AQ9Y4C1 1321 aa16.24■□□□□ 0.19
CDH1-213ENST00000612417 ERICH4A6NGS2 130 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 EPHB6O15197 1021 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
CDH1-213ENST00000612417 INPP5BP32019 993 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 CYP27A1Q02318 531 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 C9orf131Q5VYM1 1079 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 CCDC174Q6PII3 467 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 TSG101Q99816 390 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 NT5C3AQ9H0P0 336 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 VIPAS39Q9H9C1 493 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 SUGCTQ9HAC7 445 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 ADAM21Q9UKJ8 722 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 JRKLQ9Y4A0 524 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 IDEP14735 1019 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 KIF11P52732 1056 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 ZNF572Q7Z3I7 529 aaPredicted RBP16.23■□□□□ 0.19
CDH1-213ENST00000612417 BAP1Q92560 729 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 IFIH1Q9BYX4 1025 aaKnown RBP16.23■□□□□ 0.19
CDH1-213ENST00000612417 DUSP10Q9Y6W6 482 aa16.23■□□□□ 0.19
CDH1-213ENST00000612417 SRGAP2O75044 1071 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 PLEKP08567 350 aaPredicted RBP16.22■□□□□ 0.19
CDH1-213ENST00000612417 PRLRP16471 622 aa16.22■□□□□ 0.19
CDH1-213ENST00000612417 TAL1P17542 331 aaPredicted RBP16.22■□□□□ 0.19
CDH1-213ENST00000612417 ITIH3Q06033 890 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms