RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SLITRK6Q9H5Y7 841 aa24.53■■□□□ 1.52
SHANK2-220ENST00000608988 KDM3AQ9Y4C1 1321 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 A0A087X0T9 212 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 C5orf60A6NFR6 353 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 LDHCP07864 332 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 FAM228BP0C875 321 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 ERVK-9P63128 1117 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 ATP2B2Q01814 1243 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 RAPGEF1Q13905 1077 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 SLC12A6Q9UHW9 1150 aa24.52■■□□□ 1.52
SHANK2-220ENST00000608988 PGRMC1O00264 195 aaKnown RBP24.51■■□□□ 1.51
SHANK2-220ENST00000608988 TRAPPC3O43617 180 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 KLRK1P26718 216 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 ECHS1P30084 290 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 RDXP35241 583 aaKnown RBP24.51■■□□□ 1.51
SHANK2-220ENST00000608988 HLTFQ14527 1009 aaKnown RBP eCLIP24.51■■□□□ 1.512e-6■■□□□ 11.9
SHANK2-220ENST00000608988 EDRF1Q3B7T1 1238 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 CCDC65Q8IXS2 484 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 CCDC13Q8IYE1 715 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 LMBR1Q8WVP7 490 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 NT5C3AQ9H0P0 336 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 RIOX1Q9H6W3 641 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 KLC4Q9NSK0 619 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 PANK4Q9NVE7 773 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 MYH14Q7Z406 1995 aaKnown RBP24.51■■□□□ 1.51
SHANK2-220ENST00000608988 LDHBP07195 334 aaKnown RBP24.51■■□□□ 1.51
SHANK2-220ENST00000608988 NOVP48745 357 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 ADCY7P51828 1080 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 CDR1P51861 262 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 ITPK1Q13572 414 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 MAGEC3Q8TD91 643 aa24.51■■□□□ 1.51
SHANK2-220ENST00000608988 SH3RF3Q8TEJ3 882 aaPredicted RBP24.51■■□□□ 1.51
SHANK2-220ENST00000608988 NAP1L4Q99733 375 aaKnown RBP24.51■■□□□ 1.51
SHANK2-220ENST00000608988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.51■■□□□ 1.518e-7■■■■□ 25.8
SHANK2-220ENST00000608988 BIN2Q9UBW5 565 aaPredicted RBP24.51■■□□□ 1.51
SHANK2-220ENST00000608988 TMCO5BA8MYB1 307 aa24.5■■□□□ 1.51
SHANK2-220ENST00000608988 GOLGA8HP0CJ92 632 aa24.5■■□□□ 1.51
SHANK2-220ENST00000608988 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.5■■□□□ 1.513e-8■■□□□ 11.5
SHANK2-220ENST00000608988 INTUQ9ULD6 942 aa24.5■■□□□ 1.51
SHANK2-220ENST00000608988 ZNF831Q5JPB2 1677 aa24.5■■□□□ 1.51
SHANK2-220ENST00000608988 SNED1Q8TER0 1413 aa24.5■■□□□ 1.51
SHANK2-220ENST00000608988 A0A0A6YYK5 440 aaPredicted RBP24.49■■□□□ 1.51
SHANK2-220ENST00000608988 KCNK3O14649 394 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 SEC24CP53992 1094 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 PPP2R2AP63151 447 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 ZNF844Q08AG5 666 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 IFT88Q13099 833 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 C16orf86Q6ZW13 317 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 KLHL7Q8IXQ5 586 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 LRRC57Q8N9N7 239 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 SEC14L1Q92503 715 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 NYXQ9GZU5 481 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 CXorf56Q9H5V9 222 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 CNOT10Q9H9A5 744 aaKnown RBP24.49■■□□□ 1.51
SHANK2-220ENST00000608988 TFCP2L1Q9NZI6 479 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 IRS2Q9Y4H2 1338 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 TAF1P21675 1872 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 CCDC172P0C7W6 258 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 CTNNA1P35221 906 aaKnown RBP24.49■■□□□ 1.51
SHANK2-220ENST00000608988 LRRC41Q15345 812 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 LACTB2Q53H82 288 aaPredicted RBP24.49■■□□□ 1.51
SHANK2-220ENST00000608988 RASGEF1CQ8N431 466 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 CCDC26Q8TAB7 109 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 EYA3Q99504 573 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 FAM114A2Q9NRY5 505 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 SWAP70Q9UH65 585 aa24.49■■□□□ 1.51
SHANK2-220ENST00000608988 COL5A3P25940 1745 aaPredicted RBP24.48■■□□□ 1.51
SHANK2-220ENST00000608988 GCFC2P16383 781 aaKnown RBP24.48■■□□□ 1.51
SHANK2-220ENST00000608988 EPS15P42566 896 aa24.48■■□□□ 1.51
SHANK2-220ENST00000608988 NPEPPSP55786 919 aa24.48■■□□□ 1.51
SHANK2-220ENST00000608988 EIF3BP55884 814 aaKnown RBP24.48■■□□□ 1.51
SHANK2-220ENST00000608988 UAP1Q16222 522 aaPredicted RBP24.48■■□□□ 1.51
SHANK2-220ENST00000608988 SYCE1Q8N0S2 351 aa24.48■■□□□ 1.51
SHANK2-220ENST00000608988 PIGSQ96S52 555 aa24.48■■□□□ 1.51
SHANK2-220ENST00000608988 ADAMTS1Q9UHI8 967 aa24.48■■□□□ 1.51
SHANK2-220ENST00000608988 SLC37A4O43826 429 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 PRKCIP41743 596 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 PREPLQ4J6C6 727 aaPredicted RBP24.47■■□□□ 1.51
SHANK2-220ENST00000608988 CENPTQ96BT3 561 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 SUCLA2Q9P2R7 463 aaPredicted RBP24.47■■□□□ 1.51
SHANK2-220ENST00000608988 FBXL5Q9UKA1 691 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 A0A0G2JS52 829 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 HPDP32754 393 aaPredicted RBP24.47■■□□□ 1.51
SHANK2-220ENST00000608988 IFFO1Q0D2I5 559 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 PPP2R5EQ16537 467 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 SLFN11Q7Z7L1 901 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 FAM133AQ8N9E0 248 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 SLC40A1Q9NP59 571 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 TMEM260Q9NX78 707 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 DDX20Q9UHI6 824 aaKnown RBP24.47■■□□□ 1.51
SHANK2-220ENST00000608988 PCDHA2Q9Y5H9 948 aa24.47■■□□□ 1.51
SHANK2-220ENST00000608988 DDX60LQ5H9U9 1706 aaKnown RBP24.46■■□□□ 1.51
SHANK2-220ENST00000608988 CETN3O15182 167 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 C21orf2O43822 256 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 CEP104O60308 925 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 ZBTB48P10074 688 aaPredicted RBP24.46■■□□□ 1.51
SHANK2-220ENST00000608988 GHRP10912 638 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 ASPRV1Q53RT3 343 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 KCNK18Q7Z418 384 aa24.46■■□□□ 1.51
SHANK2-220ENST00000608988 FRMD5Q7Z6J6 570 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms