RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 ZNF202O95125 648 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 TXNP10599 105 aaKnown RBP12.51□□□□□ -0.41
CTCFL-214ENST00000608108 SP4Q02446 784 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 ACVR2BQ13705 512 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 KARSQ15046 597 aaKnown RBP12.51□□□□□ -0.41
CTCFL-214ENST00000608108 ARHGEF6Q15052 776 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 LY6KQ17RY6 165 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 ZNF746Q6NUN9 644 aaPredicted RBP12.51□□□□□ -0.41
CTCFL-214ENST00000608108 CAVIN1Q6NZI2 390 aaKnown RBP12.51□□□□□ -0.41
CTCFL-214ENST00000608108 MIER3Q7Z3K6 550 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 TRIB2Q92519 343 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 CALML4Q96GE6 196 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 SLC9A2Q9UBY0 812 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 CCDC39Q9UFE4 941 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 SAMM50Q9Y512 469 aa12.51□□□□□ -0.41
CTCFL-214ENST00000608108 KDM3AQ9Y4C1 1321 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 RBM47A0AV96 593 aaKnown RBP12.5□□□□□ -0.41
CTCFL-214ENST00000608108 WDR64B1ANS9 1081 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 FARP2O94887 1054 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-214ENST00000608108 GGPS1O95749 300 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 CCNE2O96020 404 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 IGHA2P01877 340 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 CCT6AP40227 531 aaKnown RBP12.5□□□□□ -0.41
CTCFL-214ENST00000608108 ADCYAP1R1P41586 468 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 JAK3P52333 1124 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 IRF5Q13568 498 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 CCDC62Q6P9F0 684 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 SMAP1Q8IYB5 467 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-214ENST00000608108 DHX58Q96C10 678 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 CDK5RAP3Q96JB5 506 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 PLIN2Q99541 437 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 EIF2AK1Q9BQI3 630 aaKnown RBP12.5□□□□□ -0.41
CTCFL-214ENST00000608108 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
CTCFL-214ENST00000608108 DDX19AQ9NUU7 478 aaKnown RBP12.5□□□□□ -0.41
CTCFL-214ENST00000608108 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
CTCFL-214ENST00000608108 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 PLCG1P19174 1290 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 SFNP31947 248 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 STAT6P42226 847 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 EPHA7Q15375 998 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 E2F4Q16254 413 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 PRAMEF19Q5SWL8 479 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 MFSD14CQ5VZR4 134 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 METTL7BQ6UX53 244 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 CATSPER3Q86XQ3 398 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 TRMT44Q8IYL2 757 aaKnown RBP12.49□□□□□ -0.41
CTCFL-214ENST00000608108 IQUBQ8NA54 791 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 RAET1EQ8TD07 263 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 SYAP1Q96A49 352 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-214ENST00000608108 MLXIPQ9HAP2 919 aa12.49□□□□□ -0.41
CTCFL-214ENST00000608108 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 C19orf67A6NJJ6 358 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 SLC26A4O43511 780 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 MED24O75448 989 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 SPATA31C1P0DKV0 1188 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 RPA1P27694 616 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 ACTR2P61160 394 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 GRB10Q13322 594 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 ECM1Q16610 540 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 TMEM119Q4V9L6 283 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 CELF3Q5SZQ8 465 aaKnown RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 TMEM63BQ5T3F8 832 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 CNNM3Q8NE01 707 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 RDM1Q8NG50 284 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 COPS5Q92905 334 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 DYDC2Q96IM9 177 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 PNMA5Q96PV4 448 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 HSD17B14Q9BPX1 270 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 LXNQ9BS40 222 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 NT5C3AQ9H0P0 336 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 NUP62CLQ9H1M0 184 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 RGL1Q9NZL6 768 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 TMEM63CQ9P1W3 806 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 KIAA1024Q9UPX6 916 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 TELO2Q9Y4R8 837 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 NOP56O00567 594 aaKnown RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 ACTN4O43707 911 aaKnown RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 ADCY3O60266 1144 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 GH1P01241 217 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 ELNP15502 786 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 SMPD1P17405 629 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 PTGS1P23219 599 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 CTTNQ14247 550 aaKnown RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 LONRF3Q496Y0 759 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 DUSP28Q4G0W2 176 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 NAALADL2Q58DX5 795 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 HYIQ5T013 277 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 GJC2Q5T442 439 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-214ENST00000608108 CCDC183Q5T5S1 534 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 IQSEC1Q6DN90 963 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 POTEGQ6S5H5 508 aa12.48□□□□□ -0.41
CTCFL-214ENST00000608108 KRBA2Q6ZNG9 492 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms