RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
CTSA-211ENST00000606066 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
CTSA-211ENST00000606066 TBX3O15119 743 aa16.14■□□□□ 0.17
CTSA-211ENST00000606066 MDM2Q00987 491 aaPredicted RBP16.14■□□□□ 0.17
CTSA-211ENST00000606066 FAM20AQ96MK3 541 aa16.14■□□□□ 0.17
CTSA-211ENST00000606066 MROH7Q68CQ1 1323 aa16.14■□□□□ 0.17
CTSA-211ENST00000606066 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 ARVCFO00192 962 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 DHX15O43143 795 aaKnown RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 GAS7O60861 476 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 ATP2B1P20020 1258 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 TCF7P36402 384 aaPredicted RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 KRT76Q01546 638 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 ORC2Q13416 577 aaPredicted RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 ITGA7Q13683 1181 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 SNX17Q15036 470 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 LRCH2Q5VUJ6 765 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 ZNF746Q6NUN9 644 aaPredicted RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 SLFN12Q8IYM2 578 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 SLC5A5Q92911 643 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 LBHD1Q9BQE6 289 aaPredicted RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 TEKT3Q9BXF9 490 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 ZNF215Q9UL58 517 aaPredicted RBP16.13■□□□□ 0.17
CTSA-211ENST00000606066 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 VCANP13611 3396 aa16.13■□□□□ 0.17
CTSA-211ENST00000606066 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
CTSA-211ENST00000606066 SLC37A4O43826 429 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 NEMFO60524 1076 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 F2P00734 622 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 LGALS2P05162 132 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 SYT1P21579 422 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 ACTR2P61160 394 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 RILPL1Q5EBL4 403 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 NFRKBQ6P4R8 1299 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 ETNPPLQ8TBG4 499 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 AZI2Q9H6S1 392 aa16.12■□□□□ 0.17
CTSA-211ENST00000606066 GSTTP1A0A1W2PQM5 241 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 H3BRB1 525 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 ATG7O95352 703 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 ZNF286BP0CG31 522 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 PSEN2P49810 448 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 CDK7P50613 346 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 RTP1P59025 263 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 CHMP4BP1P59074 171 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 PSMC6P62333 389 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 PTPN11Q06124 597 aaPredicted RBP16.11■□□□□ 0.17
CTSA-211ENST00000606066 MFSD10Q14728 455 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 CALCRLQ16602 461 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 TTC38Q5R3I4 469 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 UTP14CQ5TAP6 766 aaKnown RBP16.11■□□□□ 0.17
CTSA-211ENST00000606066 MIS18BP1Q6P0N0 1132 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 BRAPQ7Z569 592 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 SLC43A3Q8NBI5 491 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 KAT2BQ92831 832 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 GLG1Q92896 1179 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 TNPO1Q92973 898 aaKnown RBP16.11■□□□□ 0.17
CTSA-211ENST00000606066 TOX2Q96NM4 488 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 UIMC1Q96RL1 719 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 C16orf70Q9BSU1 422 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 SMARCAD1Q9H4L7 1026 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 TUT1Q9H6E5 874 aaKnown RBP16.11■□□□□ 0.17
CTSA-211ENST00000606066 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 ATP11BQ9Y2G3 1177 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 PCDHA10Q9Y5I2 948 aa16.11■□□□□ 0.17
CTSA-211ENST00000606066 DCDC2CA8MYV0 355 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 WDR64B1ANS9 1081 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 TLR3O15455 904 aaKnown RBP16.1■□□□□ 0.17
CTSA-211ENST00000606066 STX6O43752 255 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 PSMD10O75832 226 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 CCNE2O96020 404 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 PSAPP07602 524 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 SFNP31947 248 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 MCM7P33993 719 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 JAK3P52333 1124 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 KIAA0753Q2KHM9 967 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 NBPF20Q3BBV1 942 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 TRIM60Q495X7 471 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 ANKRD33Q7Z3H0 272 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 POTEDQ86YR6 584 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 C7orf31Q8N865 590 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 RDM1Q8NG50 284 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 ERAP1Q9NZ08 941 aa16.1■□□□□ 0.17
CTSA-211ENST00000606066 HAS3O00219 553 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 BACH1O14867 736 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 PQBP1O60828 265 aaKnown RBP16.09■□□□□ 0.17
CTSA-211ENST00000606066 LGR5O75473 907 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 SLC26A2P50443 739 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 STAT5BP51692 787 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 TLE2Q04725 743 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 ZNF174Q15697 407 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 FAM47CQ5HY64 1035 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 FAM160B1Q5W0V3 765 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 ABHD15Q6UXT9 468 aa16.09■□□□□ 0.17
CTSA-211ENST00000606066 PLPPR4Q7Z2D5 763 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms