RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 SAMD3Q8N6K7 520 aa21.97■■□□□ 1.11
MMP28-201ENST00000605424 PRPF38AQ8NAV1 312 aaKnown RBP21.97■■□□□ 1.11
MMP28-201ENST00000605424 TBC1D5Q92609 795 aa21.97■■□□□ 1.11
MMP28-201ENST00000605424 EIF3CQ99613 913 aaKnown RBP21.97■■□□□ 1.11
MMP28-201ENST00000605424 WDR18Q9BV38 432 aa21.97■■□□□ 1.11
MMP28-201ENST00000605424 IRX2Q9BZI1 471 aaPredicted RBP21.97■■□□□ 1.11
MMP28-201ENST00000605424 KIAA1683Q9H0B3 1180 aa21.97■■□□□ 1.11
MMP28-201ENST00000605424 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.97■■□□□ 1.11
MMP28-201ENST00000605424 PNMA2Q9UL42 364 aa21.97■■□□□ 1.11
MMP28-201ENST00000605424 V9GYY5 206 aaPredicted RBP21.97■■□□□ 1.11
MMP28-201ENST00000605424 NPHP3-ACAD11A0A0J9YXS1 232 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 CTAGE9A4FU28 777 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 KLK7P49862 253 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 HSD17B4P51659 736 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 KRT26Q7Z3Y9 468 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 TEPSINQ96N21 525 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 ZNF341Q9BYN7 854 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 MAP3K20Q9NYL2 800 aaKnown RBP21.96■■□□□ 1.11
MMP28-201ENST00000605424 FAM184BQ9ULE4 1060 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 MEIS1O00470 390 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 CTNND1O60716 968 aaKnown RBP21.96■■□□□ 1.11
MMP28-201ENST00000605424 TUBB4BP68371 445 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 GHRHRQ02643 423 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 CCDC40Q4G0X9 1142 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 MCF2L2Q86YR7 1114 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 ATAD5Q96QE3 1844 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 REEP2Q9BRK0 252 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 GLIS2Q9BZE0 524 aaPredicted RBP21.96■■□□□ 1.11
MMP28-201ENST00000605424 LTBP3Q9NS15 1303 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 TRAF3IP3Q9Y228 551 aa21.96■■□□□ 1.11
MMP28-201ENST00000605424 REXO2Q9Y3B8 237 aaKnown RBP21.96■■□□□ 1.11
MMP28-201ENST00000605424 SMCHD1A6NHR9 2005 aa21.95■■□□□ 1.1
MMP28-201ENST00000605424 EML1O00423 815 aa21.95■■□□□ 1.1
MMP28-201ENST00000605424 GAP43P17677 238 aa21.95■■□□□ 1.1
MMP28-201ENST00000605424 PPP2R3AQ06190 1150 aa21.95■■□□□ 1.1
MMP28-201ENST00000605424 EPM2AIP1Q7L775 607 aaPredicted RBP21.95■■□□□ 1.1
MMP28-201ENST00000605424 EHBP1Q8NDI1 1231 aa21.95■■□□□ 1.1
MMP28-201ENST00000605424 NHEJ1Q9H9Q4 299 aaPredicted RBP21.95■■□□□ 1.1
MMP28-201ENST00000605424 FBXO28Q9NVF7 368 aa21.95■■□□□ 1.1
MMP28-201ENST00000605424 TBC1D7Q9P0N9 293 aa21.95■■□□□ 1.1
MMP28-201ENST00000605424 A0A0U1RQJ8 604 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 NFKBIEO00221 500 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 CETN3O15182 167 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 NKRFO15226 690 aaKnown RBP eCLIP21.94■■□□□ 1.1
MMP28-201ENST00000605424 PRELPP51888 382 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 BMT2Q1RMZ1 405 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 TRIM59Q8IWR1 403 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 ATRIPQ8WXE1 791 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 NUCKS1Q9H1E3 243 aaKnown RBP21.94■■□□□ 1.1
MMP28-201ENST00000605424 BHMT2Q9H2M3 363 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 MMRN2Q9H8L6 949 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.94■■□□□ 1.1
MMP28-201ENST00000605424 CDC23Q9UJX2 597 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 CCPG1Q9ULG6 757 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 GAS7O60861 476 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 BCRP11274 1271 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 CACNB1Q02641 598 aaPredicted RBP21.94■■□□□ 1.1
MMP28-201ENST00000605424 KNOP1Q1ED39 458 aaKnown RBP21.94■■□□□ 1.1
MMP28-201ENST00000605424 NIPA1Q7RTP0 329 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 LRRN4CLQ8ND94 238 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 RIT2Q99578 217 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 NAPGQ99747 312 aaPredicted RBP21.94■■□□□ 1.1
MMP28-201ENST00000605424 FGFBP2Q9BYJ0 223 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 ZHX3Q9H4I2 956 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 OLFML3Q9NRN5 406 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 KCND2Q9NZV8 630 aa21.94■■□□□ 1.1
MMP28-201ENST00000605424 ZNF536O15090 1300 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 PDXKO00764 312 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 KRT86O43790 486 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 TBCAO75347 108 aaKnown RBP21.93■■□□□ 1.1
MMP28-201ENST00000605424 SLITRK3O94933 977 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 H2AFXP16104 143 aaPredicted RBP21.93■■□□□ 1.1
MMP28-201ENST00000605424 YBX3P16989 372 aaKnown RBP eCLIP21.93■■□□□ 1.1
MMP28-201ENST00000605424 INPP5BP32019 993 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 CYP4A11Q02928 519 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 ADAM9Q13443 819 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 NELFCDQ8IXH7 590 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 SLC35F6Q8N357 371 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 CEP112Q8N8E3 955 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 NEK11Q8NG66 645 aa21.93■■□□□ 1.1
MMP28-201ENST00000605424 CALUO43852 315 aaPredicted RBP21.92■■□□□ 1.1
MMP28-201ENST00000605424 HERVK_113P62684 666 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 RAD51AP2Q09MP3 1159 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 EPHA7Q15375 998 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 SFR1Q86XK3 245 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 NEK9Q8TD19 979 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 MXRA8Q9BRK3 442 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 ZNF577Q9BSK1 485 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 TANGO6Q9C0B7 1094 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 RGL1Q9NZL6 768 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.92■■□□□ 1.1
MMP28-201ENST00000605424 RPTORQ8N122 1335 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 FDX1P10109 184 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 RINT1Q6NUQ1 792 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 FBXO38Q6PIJ6 1188 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 B3GNT9Q6UX72 402 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 CCDC42Q96M95 316 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 NACC1Q96RE7 527 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 TEKT3Q9BXF9 490 aa21.92■■□□□ 1.1
MMP28-201ENST00000605424 FAM207AQ9NSI2 230 aaPredicted RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms