RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 LIN54Q6MZP7 749 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 PTF1AQ7RTS3 328 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 TRIM50Q86XT4 487 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 SIX5Q8N196 739 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 CEP70Q8NHQ1 597 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 DPF3Q92784 378 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 L3MBTL3Q96JM7 780 aaPredicted RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 CRISPLD2Q9H0B8 497 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 SEPT11Q9NVA2 429 aaKnown RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATP11BQ9Y2G3 1177 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 MTF2Q9Y483 593 aaPredicted RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 BZW2Q9Y6E2 419 aaKnown RBP6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 SLC4A7Q9Y6M7 1214 aa6.39□□□□□ -1.39
COL4A3BP-207ENST00000604926 C17orf113A0A1B0GUU1 675 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 VSTM5A8MXK1 200 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 HOXC11O43248 304 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 RNF8O76064 485 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 POTEJP0CG39 1038 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 DDX5P17844 614 aaKnown RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MAN2A2P49641 1150 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 GTF2A2P52657 109 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PPP2R3AQ06190 1150 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 TRIM14Q14142 442 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 KIF22Q14807 665 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 NAA25Q14CX7 972 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 EAPPQ56P03 285 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 BEND6Q5SZJ8 279 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 NBPF14Q5TI25 921 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PCNX4Q63HM2 1172 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 INTS3Q68E01 1043 aaKnown RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 BICDL1Q6ZP65 573 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 RUFY3Q7L099 469 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 DDX11Q96FC9 970 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 NR1H4Q96RI1 486 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZPBPQ9BS86 351 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 HERPUD2Q9BSE4 406 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC113Q9H0I3 377 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 WNT5BQ9H1J7 359 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PCDH18Q9HCL0 1135 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PLCB1Q9NQ66 1216 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 SNTG2Q9NY99 539 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CDV3Q9UKY7 258 aaKnown RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MAFBQ9Y5Q3 323 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MYOM2P54296 1465 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 FRMD3A2A2Y4 597 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 KLRG2A4D1S0 409 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 H3BRB1 525 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 K7ENM7 598 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PDLIM1O00151 329 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PLOD2O00469 737 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 APAF1O14727 1248 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PLOD3O60568 738 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MCM3P25205 808 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 GBP2P32456 591 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CETN2P41208 172 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 FUT2Q10981 343 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 ITGA7Q13683 1181 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 PRKG1Q13976 671 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MAP7Q14244 749 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 STK11Q15831 433 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC57Q2TAC2 916 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 ATP13A4Q4VNC1 1196 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 DACT2Q5SW24 774 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 TMTC4Q5T4D3 741 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 BNC2Q6ZN30 1099 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC121Q6ZUS5 278 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 SNX27Q96L92 541 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 SMARCAD1Q9H4L7 1026 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 TUT1Q9H6E5 874 aaKnown RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 NLRC4Q9NPP4 1024 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 ITGB1BP2Q9UKP3 347 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 AGO2Q9UKV8 859 aaKnown RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 LY75O60449 1722 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 AATKQ6ZMQ8 1374 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCNB3Q8WWL7 1395 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 TMEM247A6NEH6 219 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MAP3K6O95382 1288 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 TOP1P11387 765 aaKnown RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 VAC14Q08AM6 782 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CBX3Q13185 183 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 G3BP1Q13283 466 aaKnown RBP eCLIP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZRSR1Q15695 479 aaKnown RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 C1orf228Q6PIY5 440 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCDC83Q8IWF9 413 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZBTB8BQ8NAP8 495 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 GOLM1Q8NBJ4 401 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 BCL7CQ8WUZ0 217 aaPredicted RBP6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 GTF3C6Q969F1 213 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 MALT1Q9UDY8 824 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 SH3BGRL2Q9UJC5 107 aa6.38□□□□□ -1.39
COL4A3BP-207ENST00000604926 AP3B1O00203 1094 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 CACNB4O00305 520 aaPredicted RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ZNF3P17036 446 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 ADCY8P40145 1251 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 CCNA1P78396 465 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 PHEXP78562 749 aa6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 BASP1P80723 227 aaKnown RBP6.37□□□□□ -1.39
COL4A3BP-207ENST00000604926 NCBP1Q09161 790 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms