RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 CDK5RAP1Q96SZ6 601 aaKnown RBP4.23□□□□□ -1.73
SGMS1-207ENST00000602619 SYT3Q9BQG1 590 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 PDGFDQ9GZP0 370 aaPredicted RBP4.23□□□□□ -1.73
SGMS1-207ENST00000602619 C11orf21Q9P2W6 132 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 GULP1Q9UBP9 304 aa4.23□□□□□ -1.73
SGMS1-207ENST00000602619 MRPL42Q9Y6G3 142 aaKnown RBP4.23□□□□□ -1.73
SGMS1-207ENST00000602619 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.22□□□□□ -1.73
SGMS1-207ENST00000602619 TLDC2A0PJX2 215 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 BLACEA4D250 179 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 MYO1BO43795 1136 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 NAT1P18440 290 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 RPL13P26373 211 aaKnown RBP4.22□□□□□ -1.73
SGMS1-207ENST00000602619 BCL6P41182 706 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 PLEKHG4Q58EX7 1191 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 FAM26FQ5R3K3 315 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 BORAQ6PGQ7 559 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 KCNT2Q6UVM3 1135 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 HOMER1Q86YM7 354 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 PALM2Q8IXS6 379 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 SLC7A14Q8TBB6 771 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 GORASP1Q9BQQ3 440 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 WDR26Q9H7D7 661 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 SLC52A2Q9HAB3 445 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 TRIM39Q9HCM9 518 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 MARCH2Q9P0N8 246 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 RWDD3Q9Y3V2 267 aa4.22□□□□□ -1.73
SGMS1-207ENST00000602619 ESYT3A0FGR9 886 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 C22orf46C9J442 243 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 GPR42O15529 346 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 FPR2P25090 351 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 SLC9A5Q14940 896 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 CYP4F22Q6NT55 531 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 CABP7Q86V35 215 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 FAM124AQ86V42 546 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 DCP2Q8IU60 420 aaKnown RBP4.21□□□□□ -1.74
SGMS1-207ENST00000602619 TEX2Q8IWB9 1127 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 TXNDC5Q8NBS9 432 aaKnown RBP4.21□□□□□ -1.74
SGMS1-207ENST00000602619 DNERQ8NFT8 737 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 TMEM169Q96HH4 297 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 WWC2-AS2Q96NR7 200 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 IPO9Q96P70 1041 aaKnown RBP4.21□□□□□ -1.74
SGMS1-207ENST00000602619 C11orf84Q9BUA3 381 aaPredicted RBP4.21□□□□□ -1.74
SGMS1-207ENST00000602619 EPB41L1Q9H4G0 881 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 SFMBT1Q9UHJ3 866 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 ZNF652Q9Y2D9 606 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 PCDHA2Q9Y5H9 948 aa4.21□□□□□ -1.74
SGMS1-207ENST00000602619 LAMTOR5O43504 91 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 B4GALT3O60512 393 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 TADA3O75528 432 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 ZBTB7AO95365 584 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 FUCA1P04066 466 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 GRK2P25098 689 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 THBS2P35442 1172 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 GRK3P35626 688 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 TGFB2P61812 414 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 R3HDM1Q15032 1099 aaKnown RBP4.2□□□□□ -1.74
SGMS1-207ENST00000602619 C16orf86Q6ZW13 317 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 CEP68Q76N32 757 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 MIB1Q86YT6 1006 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.2□□□□□ -1.74
SGMS1-207ENST00000602619 SEC14L1Q92503 715 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 APPBP2Q92624 585 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 PEX11GQ96HA9 241 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 SCLYQ96I15 445 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 FEZ1Q99689 392 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 DEF6Q9H4E7 631 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 INTS7Q9NVH2 962 aaKnown RBP4.2□□□□□ -1.74
SGMS1-207ENST00000602619 HSPBP1Q9NZL4 362 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 NUDT5Q9UKK9 219 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 TRAF6Q9Y4K3 522 aa4.2□□□□□ -1.74
SGMS1-207ENST00000602619 NPEPPSL1A6NEC2 478 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 SGSM2O43147 1006 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 CDC45O75419 566 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 CRTAMO95727 393 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 SOD2P04179 222 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 NTRK1P04629 796 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 C8BP07358 591 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 HMGB1P09429 215 aaKnown RBP4.19□□□□□ -1.74
SGMS1-207ENST00000602619 PAK1Q13153 545 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 FHL2Q14192 279 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 TCEA2Q15560 299 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 CHRNA2Q15822 529 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 SMN1Q16637 294 aaKnown RBP4.19□□□□□ -1.74
SGMS1-207ENST00000602619 TKFCQ3LXA3 575 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 OTOP3Q7RTS5 596 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 BRAPQ7Z569 592 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 PCDH19Q8TAB3 1148 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 PHOSPHO1Q8TCT1 267 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 TRMT2BQ96GJ1 504 aaKnown RBP4.19□□□□□ -1.74
SGMS1-207ENST00000602619 CLUHP3Q96NS8 147 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 ORAI3Q9BRQ5 295 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 ALG1Q9BT22 464 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 SLC6A20Q9NP91 592 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 FANCLQ9NW38 375 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 CLDND1Q9NY35 253 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 PPARGC1AQ9UBK2 798 aaKnown RBP4.19□□□□□ -1.74
SGMS1-207ENST00000602619 PLAAQ9Y263 795 aa4.19□□□□□ -1.74
SGMS1-207ENST00000602619 TMA7Q9Y2S6 64 aaKnown RBP4.19□□□□□ -1.74
SGMS1-207ENST00000602619 SHROOM4Q9ULL8 1493 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms