RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 RASAL3Q86YV0 1011 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 TPH2Q8IWU9 490 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 SYT2Q8N9I0 419 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 GIMAP8Q8ND71 665 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 PARK7Q99497 189 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 MPHOSPH6Q99547 160 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 MORF4L1Q9UBU8 362 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 TCEAL9Q9UHQ7 104 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 SPATA31C2B4DYI2 1134 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 RGS20O76081 388 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 EYA4O95677 639 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 EDNRBP24530 442 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 PSMC6P62333 389 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 KRT76Q01546 638 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 CTTNQ14247 550 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 GLIPR1L2Q4G1C9 344 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 SAPCD2Q86UD0 394 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 SMYD4Q8IYR2 804 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 PTPN18Q99952 460 aa19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 GPBP1L1Q9HC44 474 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-224ENST00000600718 ASTN1O14525 1302 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 DNAJC25-GNG10A0A024R161 153 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 MANSC4A6NHS7 340 aaPredicted RBP19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 P4HBP07237 508 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 SFNP31947 248 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 ICAM3P32942 547 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 RGMBQ6NW40 437 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 DYMQ7RTS9 669 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 GPBP1Q86WP2 473 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 NACC1Q96RE7 527 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 SENP7Q9BQF6 1050 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 R3HDMLQ9H3Y0 253 aa19.69■□□□□ 0.74
SHKBP1-224ENST00000600718 CYP11B2P19099 503 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 PPP1R2P41236 205 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 JAK3P52333 1124 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 PSMD2Q13200 908 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 STIM1Q13586 685 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 ANKRD13CQ8N6S4 541 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 RDM1Q8NG50 284 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 DNAJC19Q96DA6 116 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 NAP1L5Q96NT1 182 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 TRIM5Q9C035 493 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 GDAQ9Y2T3 454 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 NFASCO94856 1347 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 PRCPP42785 496 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 WDR78Q5VTH9 848 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 KLHL10Q6JEL2 608 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 ZNF746Q6NUN9 644 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 ADSSL1Q8N142 457 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 PORCNQ9H237 461 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 ZCCHC17Q9NP64 241 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 RWDD2AQ9UIY3 292 aa19.68■□□□□ 0.74
SHKBP1-224ENST00000600718 LOC102724159A0A0B4J2E5 919 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 IDEP14735 1019 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 KCNA2P16389 499 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 PWP2Q15269 919 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 COBLL1Q53SF7 1204 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 SPATA1Q5VX52 437 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 CCDC65Q8IXS2 484 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 MED15Q96RN5 788 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 HSD3B7Q9H2F3 369 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 ZSWIM4Q9H7M6 989 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 EFCC1Q9HA90 598 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 SAMM50Q9Y512 469 aa19.67■□□□□ 0.74
SHKBP1-224ENST00000600718 LCTP09848 1927 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 WDR64B1ANS9 1081 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 ZNF75DP51815 510 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 ARSHQ5FYA8 562 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 LXNQ9BS40 222 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 BHMT2Q9H2M3 363 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 FANCLQ9NW38 375 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 NFE2L3Q9Y4A8 694 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 KRT18P05783 430 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 PGK2P07205 417 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 INHBEP58166 350 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 FSTL1Q12841 308 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 PAK1Q13153 545 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 TRMT44Q8IYL2 757 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 SMC1BQ8NDV3 1235 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 DHTKD1Q96HY7 919 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 PANK4Q9NVE7 773 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 TLL2Q9Y6L7 1015 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 SYNRGQ9UMZ2 1314 aa19.66■□□□□ 0.74
SHKBP1-224ENST00000600718 KIF3CO14782 793 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 STRNO43815 780 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 LYPLA2O95372 231 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 CCNE2O96020 404 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 QARSP47897 775 aaKnown RBP19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 EHHADHQ08426 723 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 STK4Q13043 487 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 SMAP1Q8IYB5 467 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 ABRAQ8N0Z2 381 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 BANK1Q8NDB2 785 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 PIGOQ8TEQ8 1089 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 NELFBQ8WX92 580 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 CTNND2Q9UQB3 1225 aa19.65■□□□□ 0.74
SHKBP1-224ENST00000600718 PSMA7O14818 248 aa19.64■□□□□ 0.74
SHKBP1-224ENST00000600718 SLC10A3P09131 477 aa19.64■□□□□ 0.74
SHKBP1-224ENST00000600718 STX17P56962 302 aa19.64■□□□□ 0.74
SHKBP1-224ENST00000600718 FGD4Q96M96 766 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms