RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SAR1BQ9Y6B6 198 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 PPARDQ03181 441 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 MYCT1Q8N699 235 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 FAM133AQ8N9E0 248 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 SPAG5Q96R06 1193 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 ARHGAP20Q9P2F6 1191 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 MSH4O15457 936 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 CLSTN1O94985 981 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 C2orf54Q08AI8 447 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 CCDC181Q5TID7 509 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 TAF3Q5VWG9 929 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 SERPINA10Q9UK55 444 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 CTDP1Q9Y5B0 961 aaPredicted RBP12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 KDM3AQ9Y4C1 1321 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
ARHGEF1-220ENST00000600274 EML1O00423 815 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 CETN3O15182 167 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 CLK2P49760 499 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 VSNL1P62760 191 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 TMEM119Q4V9L6 283 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 LRCH2Q5VUJ6 765 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 PRAMEF18Q5VWM3 479 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 SEPT11Q9NVA2 429 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 HDAC9Q9UKV0 1011 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 FZD1Q9UP38 647 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 PLSCR1O15162 318 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 FAM13AO94988 1023 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 PLA2G4AP47712 749 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 NBPF9Q3BBW0 867 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZC2HC1CQ53FD0 456 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 MAST2Q6P0Q8 1798 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 SCFD1Q8WVM8 642 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 CCDC43Q96MW1 224 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 EHD4Q9H223 541 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 VPS18Q9P253 973 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 CAPN6Q9Y6Q1 641 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 ABCB11O95342 1321 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZNF263O14978 683 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 GAS7O60861 476 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 NMT1P30419 496 aaKnown RBP12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 CYP2J2P51589 502 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 LRRC63Q05C16 580 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 PRKG1Q13976 671 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 SLFN12Q8IYM2 578 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 DYDC2Q96IM9 177 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 RUSC1Q9BVN2 902 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 IDI2Q9BXS1 227 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 ADAMTS1Q9UHI8 967 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 PACSIN2Q9UNF0 486 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
ARHGEF1-220ENST00000600274 TMCO5BA8MYB1 307 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 LRRC55Q6ZSA7 311 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 RSRC2Q7L4I2 434 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 TTLL6Q8N841 843 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 BANK1Q8NDB2 785 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 EIF2AK1Q9BQI3 630 aaKnown RBP12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZNF70Q9UC06 446 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 TCEAL9Q9UHQ7 104 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 PCNTO95613 3336 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 PLIN4Q96Q06 1357 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ALAS1P13196 640 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 PPP1R2P41236 205 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 NOVP48745 357 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 IRX5P78411 483 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ARSHQ5FYA8 562 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZNF772Q68DY9 489 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 NFRKBQ6P4R8 1299 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 AGBL1Q96MI9 1066 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZNF341Q9BYN7 854 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 GOLPH3Q9H4A6 298 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ANKZF1Q9H8Y5 726 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF1-220ENST00000600274 TACC1O75410 805 aa12.71□□□□□ -0.38
ARHGEF1-220ENST00000600274 TBC1D8O95759 1140 aa12.71□□□□□ -0.38
ARHGEF1-220ENST00000600274 DPEP1P16444 411 aa12.71□□□□□ -0.38
ARHGEF1-220ENST00000600274 NOP2P46087 812 aaKnown RBP12.71□□□□□ -0.38
ARHGEF1-220ENST00000600274 CASP4P49662 377 aa12.71□□□□□ -0.38
ARHGEF1-220ENST00000600274 HSP90B2PQ58FF3 399 aa12.71□□□□□ -0.38
ARHGEF1-220ENST00000600274 UBR3Q6ZT12 1888 aa12.71□□□□□ -0.38
ARHGEF1-220ENST00000600274 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 FTCDO95954 541 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 MYCLP12524 364 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 SLC9A1P19634 815 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 USP11P51784 963 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 SLC7A5Q01650 507 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 SFMBT2Q5VUG0 894 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
ARHGEF1-220ENST00000600274 ERLIN1O75477 346 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms