RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 KIAA0907Q7Z7F0 614 aaPredicted RBP7□□□□□ -1.29
SMAD4-216ENST00000593223 FAM26EQ8N5C1 309 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 C2orf69Q8N8R5 385 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 CLEC4DQ8WXI8 215 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 INTS7Q9NVH2 962 aaKnown RBP7□□□□□ -1.29
SMAD4-216ENST00000593223 SRPK3Q9UPE1 567 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 MYO15BQ96JP2 1530 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 TCRBV5S4A2TA0A5A2 114 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 M0R2C6 588 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 NUAK1O60285 661 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 AMY2AP04746 511 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 C8BP07358 591 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 AMY2BP19961 511 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 NEK4P51957 841 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 LACTBP83111 547 aaPredicted RBP6.99□□□□□ -1.29
SMAD4-216ENST00000593223 CFAP100Q494V2 611 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 TMEM177Q53S58 311 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 PLEKHG4Q58EX7 1191 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 PIK3R6Q5UE93 754 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 CIAPIN1Q6FI81 312 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 TMEFF1Q8IYR6 380 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 SH3RF2Q8TEC5 729 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 MFSD3Q96ES6 412 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 PWWP2AQ96N64 755 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 RIC8BQ9NVN3 520 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 ATP23Q9Y6H3 246 aa6.99□□□□□ -1.29
SMAD4-216ENST00000593223 ZNF561-AS1K7EIQ3 104 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 MAN2B1O00754 1011 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 KCNA6P17658 529 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 GYS2P54840 703 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 PAN2Q504Q3 1202 aaKnown RBP6.98□□□□□ -1.29
SMAD4-216ENST00000593223 DALRD3Q5D0E6 543 aaKnown RBP6.98□□□□□ -1.29
SMAD4-216ENST00000593223 FIGNQ5HY92 759 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 BTBD8Q5XKL5 378 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 OVCH1Q7RTY7 1134 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 LRRTM3Q86VH5 581 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 FAM129CQ86XR2 697 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 WNK4Q96J92 1243 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 TOX2Q96NM4 488 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 IRF2BPLQ9H1B7 796 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 PCDH18Q9HCL0 1135 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 CABP5Q9NP86 173 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 PMF1-BGLAPU3KQ54 211 aa6.98□□□□□ -1.29
SMAD4-216ENST00000593223 SLC12A8A0AV02 714 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 GLRX3O76003 335 aaKnown RBP6.97□□□□□ -1.29
SMAD4-216ENST00000593223 EPHA5P54756 1037 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 FZD5Q13467 585 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 CR1LQ2VPA4 569 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 CDCA2Q69YH5 1023 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-216ENST00000593223 TEPPQ6URK8 271 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 STK32CQ86UX6 486 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 TTLL11Q8NHH1 800 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 ZBTB8AQ96BR9 441 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 SMURF1Q9HCE7 757 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 TELO2Q9Y4R8 837 aa6.97□□□□□ -1.29
SMAD4-216ENST00000593223 DBX1A6NMT0 343 aa6.96□□□□□ -1.3
SMAD4-216ENST00000593223 SCDO00767 359 aa6.96□□□□□ -1.3
SMAD4-216ENST00000593223 KPNA6O60684 536 aa6.96□□□□□ -1.3
SMAD4-216ENST00000593223 HIP1RO75146 1068 aa6.96□□□□□ -1.3
SMAD4-216ENST00000593223 KRT37O76014 449 aa6.96□□□□□ -1.3
SMAD4-216ENST00000593223 LRG1P02750 347 aa6.96□□□□□ -1.3
SMAD4-216ENST00000593223 FAHP16930 419 aa6.96□□□□□ -1.3
SMAD4-216ENST00000593223 PTPN1P18031 435 aaKnown RBP6.96□□□□□ -1.3
SMAD4-216ENST00000593223 ZSCAN18Q8TBC5 510 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-216ENST00000593223 PRAMEF25A6NGN4 478 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 MYCLP1P12525 358 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-216ENST00000593223 GJA4P35212 333 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 AFF3P51826 1226 aaKnown RBP6.95□□□□□ -1.3
SMAD4-216ENST00000593223 SMAD4Q13485 552 aaKnown RBP6.95□□□□□ -1.3
SMAD4-216ENST00000593223 ARHGAP44Q17R89 818 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 CPZQ66K79 652 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 VASNQ6EMK4 673 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 HHIPL2Q6UWX4 724 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 TMC5Q6UXY8 1006 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 TMEM151BQ8IW70 566 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 LRRC56Q8IYG6 542 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-216ENST00000593223 CHST14Q8NCH0 376 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 DDX1Q92499 740 aaKnown RBP6.95□□□□□ -1.3
SMAD4-216ENST00000593223 NOX5Q96PH1 765 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 SYT3Q9BQG1 590 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 KRTAP4-2Q9BYR5 136 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 EPB41L4AQ9HCS5 686 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-216ENST00000593223 ARAP1Q96P48 1450 aa6.95□□□□□ -1.3
SMAD4-216ENST00000593223 FAM90A27PA6NNH2 459 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 CLASP2O75122 1294 aaKnown RBP6.94□□□□□ -1.3
SMAD4-216ENST00000593223 PLA2G1BP04054 148 aaKnown RBP6.94□□□□□ -1.3
SMAD4-216ENST00000593223 TM4SF20Q53R12 229 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 TCERG1LQ5VWI1 586 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 AHI1Q8N157 1196 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 PPM1KQ8N3J5 372 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 FNIP1Q8TF40 1166 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 C11orf84Q9BUA3 381 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-216ENST00000593223 TARS2Q9BW92 718 aaKnown RBP6.94□□□□□ -1.3
SMAD4-216ENST00000593223 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 ZKSCAN5Q9Y2L8 839 aa6.94□□□□□ -1.3
SMAD4-216ENST00000593223 LOC105371045A0A1W2PR82 267 aa6.93□□□□□ -1.3
SMAD4-216ENST00000593223 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
SMAD4-216ENST00000593223 ACOT7O00154 380 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms