RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 POTEB2H3BUK9 544 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 MAFGO15525 162 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 PSMD10O75832 226 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 ARP10275 920 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 MYCLP12524 364 aaPredicted RBP15.12■□□□□ 0.01
VMP1-217ENST00000593168 PRKAR2AP13861 404 aaKnown RBP15.12■□□□□ 0.01
VMP1-217ENST00000593168 SPIRE1Q08AE8 756 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 KARSQ15046 597 aaKnown RBP15.12■□□□□ 0.01
VMP1-217ENST00000593168 RRAGBQ5VZM2 374 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 PDXDC2PQ6P474 469 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 SASS6Q6UVJ0 657 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 SH3RF1Q7Z6J0 888 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 GJA10Q969M2 543 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 RIT2Q99578 217 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 UBE2OQ9C0C9 1292 aaKnown RBP15.12■□□□□ 0.01
VMP1-217ENST00000593168 TSPY26PQ9H489 355 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 KCNH7Q9NS40 1196 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 VAV3Q9UKW4 847 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 CUL9Q8IWT3 2517 aa15.12■□□□□ 0.01
VMP1-217ENST00000593168 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 GOLGA6L3A6NEY3 463 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 B4DLN1 442 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 COL6A1P12109 1028 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 FCER1AP12319 257 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 STAT6P42226 847 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 CACNB2Q08289 660 aaPredicted RBP15.11■□□□□ 0.01
VMP1-217ENST00000593168 KCTD2Q14681 263 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 POSTNQ15063 836 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
VMP1-217ENST00000593168 NAALADL2Q58DX5 795 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 HYIQ5T013 277 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 LRCH2Q5VUJ6 765 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 NLRX1Q86UT6 975 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 RASSF8Q8NHQ8 419 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 ERMNQ8TAM6 284 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 SNX29Q8TEQ0 813 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 GPRASP2Q96D09 838 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 PAGE5Q96GU1 130 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 MMP19Q99542 508 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 ZNF577Q9BSK1 485 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 WDR11Q9BZH6 1224 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 MAGEF1Q9HAY2 307 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 AGO4Q9HCK5 861 aaKnown RBP15.11■□□□□ 0.01
VMP1-217ENST00000593168 TUBE1Q9UJT0 475 aa15.11■□□□□ 0.01
VMP1-217ENST00000593168 DNAJC25-GNG10A0A024R161 153 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 IPO5O00410 1097 aaKnown RBP15.1■□□□□ 0.01
VMP1-217ENST00000593168 GAS7O60861 476 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 EIF3JO75822 258 aaKnown RBP15.1■□□□□ 0.01
VMP1-217ENST00000593168 CCND3P30281 292 aaPredicted RBP15.1■□□□□ 0.01
VMP1-217ENST00000593168 ALDH5A1P51649 535 aaPredicted RBP15.1■□□□□ 0.01
VMP1-217ENST00000593168 TYRO3Q06418 890 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 GRB10Q13322 594 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 PPP2R5CQ13362 524 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 MTMR1Q13613 665 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 HAUS3Q68CZ6 603 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 B3GNT9Q6UX72 402 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 ABRAQ8N0Z2 381 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 KCTD17Q8N5Z5 321 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 USP6NLQ92738 828 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 ZFP91Q96JP5 570 aaPredicted RBP15.1■□□□□ 0.01
VMP1-217ENST00000593168 CDHR1Q96JP9 859 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 INPP4AQ96PE3 977 aaPredicted RBP15.1■□□□□ 0.01
VMP1-217ENST00000593168 PNMA5Q96PV4 448 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 MPHOSPH6Q99547 160 aaKnown RBP15.1■□□□□ 0.01
VMP1-217ENST00000593168 NUDT12Q9BQG2 462 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 NT5C3AQ9H0P0 336 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 PORCNQ9H237 461 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 STK17AQ9UEE5 414 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 KDM3AQ9Y4C1 1321 aa15.1■□□□□ 0.01
VMP1-217ENST00000593168 SOWAHBA6NEL2 793 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 STRNO43815 780 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 CAVIN2O95810 425 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 MYL1P05976 194 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 XRCC5P13010 732 aaKnown RBP15.09■□□□□ 0.01
VMP1-217ENST00000593168 PLCG1P19174 1290 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 EDNRBP24530 442 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 SARSP49591 514 aaKnown RBP15.09■□□□□ 0.01
VMP1-217ENST00000593168 CNTN2Q02246 1040 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 PNOCQ13519 176 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 STXBP2Q15833 593 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 CCL14Q16627 93 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 LRRC26Q2I0M4 334 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 TMEM119Q4V9L6 283 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 NT5DC1Q5TFE4 455 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 LHX8Q68G74 356 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 SPATA20Q8TB22 786 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 CDK5RAP3Q96JB5 506 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 UIMC1Q96RL1 719 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 TEKT3Q9BXF9 490 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 TBC1D22BQ9NU19 505 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 KBTBD4Q9NVX7 518 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 PCDHA5Q9Y5H7 936 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 LCTP09848 1927 aa15.09■□□□□ 0.01
VMP1-217ENST00000593168 DHX15O43143 795 aaKnown RBP15.08■□□□□ 0
VMP1-217ENST00000593168 GTPBP6O43824 516 aaPredicted RBP15.08■□□□□ 0
VMP1-217ENST00000593168 SMC2O95347 1197 aa15.08■□□□□ 0
VMP1-217ENST00000593168 RPA1P27694 616 aa15.08■□□□□ 0
VMP1-217ENST00000593168 ICAM3P32942 547 aa15.08■□□□□ 0
VMP1-217ENST00000593168 CCT6AP40227 531 aaKnown RBP15.08■□□□□ 0
VMP1-217ENST00000593168 ZRSR1Q15695 479 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms