RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 TRAK2O60296 914 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 ZNF865P0CJ78 1059 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-219ENST00000592927 ZNF76P36508 570 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 NR5A1Q13285 461 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 NONOQ15233 471 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX39A-219ENST00000592927 PIK3AP1Q6ZUJ8 805 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 ANKRD33Q7Z3H0 272 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 LEO1Q8WVC0 666 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-219ENST00000592927 SPATA32Q96LK8 384 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 TOX2Q96NM4 488 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 KATNBL1Q9H079 304 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 RCOR1Q9UKL0 485 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 COG5Q9UP83 839 aa13.47□□□□□ -0.25
DDX39A-219ENST00000592927 A0A1W2PQ45 241 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-219ENST00000592927 A0A1W2PQY0 241 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 YEATS4O95619 227 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 CSF2RAP15509 400 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 NASPP49321 788 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-219ENST00000592927 UBE2HP62256 183 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 MRPS9P82933 396 aaKnown RBP13.46□□□□□ -0.25
DDX39A-219ENST00000592927 KLHL40Q2TBA0 621 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 CCDC144BQ3MJ40 725 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 GNPTABQ3T906 1256 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 TAPT1Q6NXT6 567 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 SEPT14Q6ZU15 432 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 KCNG4Q8TDN1 519 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 TNFRSF25Q93038 417 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 CHAMP1Q96JM3 812 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-219ENST00000592927 FBXL18Q96ME1 805 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 USP28Q96RU2 1077 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 XPNPEP3Q9NQH7 507 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 TFIP11Q9UBB9 837 aaKnown RBP13.46□□□□□ -0.25
DDX39A-219ENST00000592927 FAM184BQ9ULE4 1060 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 NOL7Q9UMY1 257 aaKnown RBP13.46□□□□□ -0.25
DDX39A-219ENST00000592927 REV3LO60673 3130 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 LCTP09848 1927 aa13.46□□□□□ -0.25
DDX39A-219ENST00000592927 PGK1P00558 417 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 CYP3A4P08684 503 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 AKR1A1P14550 325 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 USP11P51784 963 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 TTLL4Q14679 1199 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 INF2Q27J81 1249 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 IQSEC1Q6DN90 963 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 PSRC1Q6PGN9 363 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-219ENST00000592927 RNF180Q86T96 592 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 NLRX1Q86UT6 975 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 SCFD2Q8WU76 684 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 WDR11Q9BZH6 1224 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 GDPD2Q9HCC8 539 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 CEP131Q9UPN4 1083 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 MTCH2Q9Y6C9 303 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 MRVI1Q9Y6F6 885 aa13.45□□□□□ -0.26
DDX39A-219ENST00000592927 MORC2Q9Y6X9 1032 aaPredicted RBP13.45□□□□□ -0.26
DDX39A-219ENST00000592927 RBM47A0AV96 593 aaKnown RBP13.44□□□□□ -0.26
DDX39A-219ENST00000592927 RFXAPO00287 272 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 BMP15O95972 392 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 RARBP10826 455 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 TNFAIP2Q03169 654 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 CEP55Q53EZ4 464 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 EARS2Q5JPH6 523 aaKnown RBP13.44□□□□□ -0.26
DDX39A-219ENST00000592927 PPP2R2DQ66LE6 453 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 KCNV1Q6PIU1 500 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 NEK8Q86SG6 692 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 TMEM199Q8N511 208 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 CRYGNQ8WXF5 182 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 HLA-CQ95604 372 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 CDHR1Q96JP9 859 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 INPP4AQ96PE3 977 aaPredicted RBP13.44□□□□□ -0.26
DDX39A-219ENST00000592927 MXRA8Q9BRK3 442 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 JADE2Q9NQC1 790 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 UBIAD1Q9Y5Z9 338 aa13.44□□□□□ -0.26
DDX39A-219ENST00000592927 GOLGA6L4A6NEF3 574 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 GTPBP6O43824 516 aaPredicted RBP13.43□□□□□ -0.26
DDX39A-219ENST00000592927 RGS20O76081 388 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 TXNP10599 105 aaKnown RBP13.43□□□□□ -0.26
DDX39A-219ENST00000592927 TGFB3P10600 412 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 MYOGP15173 224 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 ITGB5P18084 799 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 CIITAP33076 1130 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 RABGGTBP53611 331 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 MTMR1Q13613 665 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 SLC39A14Q15043 492 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 STK38Q15208 465 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 LETM2Q2VYF4 491 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 NIPA1Q7RTP0 329 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 LINC00301Q8NCQ3 95 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 CYP2W1Q8TAV3 490 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 NAP1L4Q99733 375 aaKnown RBP13.43□□□□□ -0.26
DDX39A-219ENST00000592927 STARD7Q9NQZ5 370 aa13.43□□□□□ -0.26
DDX39A-219ENST00000592927 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
DDX39A-219ENST00000592927 SPATA31C2B4DYI2 1134 aa13.42□□□□□ -0.26
DDX39A-219ENST00000592927 FAM86B1E9PN63 330 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms