RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 EDRF1Q3B7T1 1238 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 CCDC40Q4G0X9 1142 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 PPP4R3CPQ6ZMV5 832 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 SRGAP1Q7Z6B7 1085 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 SFR1Q86XK3 245 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 TRIM59Q8IWR1 403 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 KCTD17Q8N5Z5 321 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 GOLGA1Q92805 767 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 DEFB129Q9H1M3 183 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 FAM53CQ9NYF3 392 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 GUCA1BQ9UMX6 200 aa17.43■□□□□ 0.38
MBD1-227ENST00000592060 ASNSP08243 561 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 PTGER2P43116 358 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 CBX1P83916 185 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 PPP2R5CQ13362 524 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 TEX35Q5T0J7 233 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 OTOP1Q7RTM1 612 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 RABGGTAQ92696 567 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 EDEM3Q9BZQ6 932 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 MMRN2Q9H8L6 949 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 MYOZ2Q9NPC6 264 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 TFR2Q9UP52 801 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 RCCD1A6NED2 376 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 PHF20L1A8MW92 1017 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 ZNF263O14978 683 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 CIAPIN1Q6FI81 312 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 LDHDQ86WU2 507 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 GPR161Q8N6U8 529 aaKnown RBP17.42■□□□□ 0.38
MBD1-227ENST00000592060 CEP112Q8N8E3 955 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 JAKMIP2Q96AA8 810 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 PURBQ96QR8 312 aaKnown RBP17.42■□□□□ 0.38
MBD1-227ENST00000592060 HSD17B14Q9BPX1 270 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 RUSC1Q9BVN2 902 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 EHMT1Q9H9B1 1298 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 TUFT1Q9NNX1 390 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 RGL1Q9NZL6 768 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 PIM2Q9P1W9 311 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 ARHGAP20Q9P2F6 1191 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 LOXHD1Q8IVV2 1947 aa17.42■□□□□ 0.38
MBD1-227ENST00000592060 PLEKP08567 350 aaPredicted RBP17.41■□□□□ 0.38
MBD1-227ENST00000592060 ERCC3P19447 782 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 HOXD13P35453 343 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 CCDC122Q5T0U0 273 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 LRCH2Q5VUJ6 765 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 ARHGAP27Q6ZUM4 889 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 KIAA1328Q86T90 577 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 CCDC155Q8N6L0 562 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 SMCR8Q8TEV9 937 aaPredicted RBP17.41■□□□□ 0.38
MBD1-227ENST00000592060 BHMT2Q9H2M3 363 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 ZHX3Q9H4I2 956 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 TRAF3IP3Q9Y228 551 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 RABGAP1Q9Y3P9 1069 aa17.41■□□□□ 0.38
MBD1-227ENST00000592060 ZSCAN20P17040 1043 aaPredicted RBP17.4■□□□□ 0.38
MBD1-227ENST00000592060 CHMP4BP1P59074 171 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 TGFB2P61812 414 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
MBD1-227ENST00000592060 BMT2Q1RMZ1 405 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 GLIPR1L2Q4G1C9 344 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 SLC30A10Q6XR72 485 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 NEK11Q8NG66 645 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 TEPSINQ96N21 525 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 LACRTQ9GZZ8 138 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 EPC1Q9H2F5 836 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 ZNF536O15090 1300 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 LRRC53A6NM62 1247 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 RSPH10B2B2RC85 870 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 LCA5LO95447 670 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 RSPH10BP0C881 870 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 MYBP10242 640 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 INPP5BP32019 993 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 HSD17B4P51659 736 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 VAV2P52735 878 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 UBXN2AP68543 259 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 WHAMMP3Q1A5X7 153 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 CEP55Q53EZ4 464 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 DYDC2Q96IM9 177 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 ZNF341Q9BYN7 854 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 TANGO6Q9C0B7 1094 aa17.4■□□□□ 0.38
MBD1-227ENST00000592060 ARGLU1Q9NWB6 273 aaPredicted RBP17.4■□□□□ 0.38
MBD1-227ENST00000592060 KRT86O43790 486 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 NOL4O94818 638 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 SLITRK3O94933 977 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 ZRANB2O95218 330 aaKnown RBP eCLIP17.39■□□□□ 0.37
MBD1-227ENST00000592060 TFRCP02786 760 aaKnown RBP17.39■□□□□ 0.37
MBD1-227ENST00000592060 PRELPP51888 382 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 ZNF280AP59817 542 aaPredicted RBP17.39■□□□□ 0.37
MBD1-227ENST00000592060 CTTNQ14247 550 aaKnown RBP17.39■□□□□ 0.37
MBD1-227ENST00000592060 RASA3Q14644 834 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 KNOP1Q1ED39 458 aaKnown RBP17.39■□□□□ 0.37
MBD1-227ENST00000592060 B3GNT9Q6UX72 402 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 CCDC42Q96M95 316 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 TAOK3Q9H2K8 898 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 FAM184BQ9ULE4 1060 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 PARP14Q460N5 1801 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 RPTORQ8N122 1335 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 IPO7O95373 1038 aaKnown RBP17.39■□□□□ 0.37
MBD1-227ENST00000592060 ICAM1P05362 532 aa17.39■□□□□ 0.37
MBD1-227ENST00000592060 SETQ01105 290 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms