RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 ETFBP38117 255 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 PCDH1Q08174 1060 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 NFIAQ12857 509 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 VGLL4Q14135 290 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 CDC42EP5Q6NZY7 148 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 REXO1Q8N1G1 1221 aaKnown RBP9.2□□□□□ -0.94
VMP1-213ENST00000591877 AGGF1Q8N302 714 aaeCLIP9.2□□□□□ -0.94
VMP1-213ENST00000591877 TMEM130Q8N3G9 435 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 OR6P1Q8NGX9 317 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 SSH3Q8TE77 659 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 ZNF384Q8TF68 577 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 TTC9Q92623 222 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 PTPN18Q99952 460 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 EMILIN2Q9BXX0 1053 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 TRIM55Q9BYV6 548 aa9.2□□□□□ -0.94
VMP1-213ENST00000591877 PDS5AQ29RF7 1337 aaKnown RBP9.2□□□□□ -0.94
VMP1-213ENST00000591877 RPAP1Q9BWH6 1393 aaPredicted RBP9.2□□□□□ -0.94
VMP1-213ENST00000591877 CCDC85CA6NKD9 419 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 F13A1P00488 732 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 INHBEP58166 350 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 ATP8B2P98198 1209 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 CTU1Q7Z7A3 348 aaKnown RBP9.19□□□□□ -0.94
VMP1-213ENST00000591877 ZFPM1Q8IX07 1006 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 FAM151AQ8WW52 585 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 PLD4Q96BZ4 506 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 OPTNQ96CV9 577 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 SHDQ96IW2 340 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 NEUROD6Q96NK8 337 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 HMG20BQ9P0W2 317 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 SNCAIPQ9Y6H5 919 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 GAKO14976 1311 aa9.19□□□□□ -0.94
VMP1-213ENST00000591877 CILPO75339 1184 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 IMPDH2P12268 514 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 GLB1P16278 677 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 CDK11BP21127 795 aaKnown RBP9.18□□□□□ -0.94
VMP1-213ENST00000591877 BMP6P22004 513 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 ZNF165P49910 485 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 TCP10Q12799 353 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 G3BP1Q13283 466 aaKnown RBP eCLIP9.18□□□□□ -0.94
VMP1-213ENST00000591877 MVPQ14764 893 aaKnown RBP9.18□□□□□ -0.94
VMP1-213ENST00000591877 RFX7Q2KHR2 1363 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 EGFLAMQ63HQ2 1017 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 CEP135Q66GS9 1140 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 ZKSCAN4Q969J2 545 aaPredicted RBP9.18□□□□□ -0.94
VMP1-213ENST00000591877 CDK5RAP2Q96SN8 1893 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 TMOD2Q9NZR1 351 aa9.18□□□□□ -0.94
VMP1-213ENST00000591877 R3HCC1Q9Y3T6 440 aaKnown RBP9.18□□□□□ -0.94
VMP1-213ENST00000591877 ATRNL1Q5VV63 1379 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 GSC2O15499 205 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 MCAMP43121 646 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 RGS19P49795 217 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 MECOMQ03112 1051 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 SEZ6Q53EL9 994 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 LLGL2Q6P1M3 1020 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 MIGA2Q7L4E1 593 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 VN1R5Q7Z5H4 357 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 JAZF1Q86VZ6 243 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 ITPRIPQ8IWB1 547 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 SULF2Q8IWU5 870 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 FTSJ3Q8IY81 847 aaKnown RBP9.17□□□□□ -0.94
VMP1-213ENST00000591877 ZGPATQ8N5A5 531 aaKnown RBP9.17□□□□□ -0.94
VMP1-213ENST00000591877 SPATA5Q8NB90 893 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 PANK1Q8TE04 598 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 BRI3BPQ8WY22 251 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 KRTAP4-9Q9BYQ8 210 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 STOML1Q9UBI4 398 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 ABCF2Q9UG63 623 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 ZNF112Q9UJU3 913 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 NOP58Q9Y2X3 529 aaKnown RBP9.17□□□□□ -0.94
VMP1-213ENST00000591877 MRVI1Q9Y6F6 885 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 TNRC18O15417 2968 aaPredicted RBP9.17□□□□□ -0.94
VMP1-213ENST00000591877 ZSWIM8A7E2V4 1837 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 PHIPQ8WWQ0 1821 aa9.17□□□□□ -0.94
VMP1-213ENST00000591877 FKTNO75072 461 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 SURF6O75683 361 aaKnown RBP9.16□□□□□ -0.94
VMP1-213ENST00000591877 ARNTP27540 789 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 GIPRP48546 466 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 RGS3P49796 1198 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 RHBDL3P58872 404 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 CAP1Q01518 475 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 CRHR2Q13324 411 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 CEP85Q6P2H3 762 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 BNC2Q6ZN30 1099 aaPredicted RBP9.16□□□□□ -0.94
VMP1-213ENST00000591877 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 DBNDD2Q9BQY9 259 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 IDI2Q9BXS1 227 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 GPR108Q9NPR9 543 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 DDX4Q9NQI0 724 aaKnown RBP9.16□□□□□ -0.94
VMP1-213ENST00000591877 FPGT-TNNI3KV9GXZ4 949 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 FOCADQ5VW36 1801 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 MAST2Q6P0Q8 1798 aa9.16□□□□□ -0.94
VMP1-213ENST00000591877 PTPRFP10586 1907 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 SIPA1L1O43166 1804 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 GPR75-ASB3A0A0A6YYF3 556 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 CCL15-CCL14A0A0B4J2E2 113 aa9.15□□□□□ -0.94
VMP1-213ENST00000591877 DDTLA6NHG4 134 aaPredicted RBP9.15□□□□□ -0.94
VMP1-213ENST00000591877 ENTPD3O75355 529 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms