RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 GBP4Q96PP9 640 aa18.78■□□□□ 0.6
GCDH-213ENST00000590627 FTOQ9C0B1 505 aaKnown RBP eCLIP18.78■□□□□ 0.6
GCDH-213ENST00000590627 Q9Y3F1 56 aa18.78■□□□□ 0.6
GCDH-213ENST00000590627 PRUNE2Q8WUY3 3088 aa18.78■□□□□ 0.6
GCDH-213ENST00000590627 LCTP09848 1927 aa18.78■□□□□ 0.6
GCDH-213ENST00000590627 MYH7BA7E2Y1 1941 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 MYH15Q9Y2K3 1946 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 CD4P01730 458 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 MCM7P33993 719 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 MRPS9P82933 396 aaKnown RBP18.77■□□□□ 0.6
GCDH-213ENST00000590627 Q4G0T1 1027 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 CEP55Q53EZ4 464 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 RASIP1Q5U651 963 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 IQSEC1Q6DN90 963 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 C4orf32Q8N8J7 132 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 LINC00301Q8NCQ3 95 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 MPHOSPH6Q99547 160 aaKnown RBP18.77■□□□□ 0.6
GCDH-213ENST00000590627 AP5M1Q9H0R1 490 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 UBIAD1Q9Y5Z9 338 aa18.77■□□□□ 0.6
GCDH-213ENST00000590627 IGLV3-22A0A075B6J6 115 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 FAM86B1E9PN63 330 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 MEIS1O00470 390 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 LAD1O00515 517 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 ZEB2O60315 1214 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 TDP2O95551 362 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 FAM86B2P0C5J1 330 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 CSF2RAP15509 400 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 ATP2C1P98194 919 aaPredicted RBP18.76■□□□□ 0.59
GCDH-213ENST00000590627 BEX3Q00994 111 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 FSCN1Q16658 493 aaKnown RBP18.76■□□□□ 0.59
GCDH-213ENST00000590627 TMEM240Q5SV17 173 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 PSRC1Q6PGN9 363 aaPredicted RBP18.76■□□□□ 0.59
GCDH-213ENST00000590627 C16orf59Q7L2K0 433 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 LEO1Q8WVC0 666 aaPredicted RBP18.76■□□□□ 0.59
GCDH-213ENST00000590627 LENG9Q96B70 501 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 MXRA8Q9BRK3 442 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 VTA1Q9NP79 307 aa18.76■□□□□ 0.59
GCDH-213ENST00000590627 DDX25Q9UHL0 483 aaKnown RBP18.76■□□□□ 0.59
GCDH-213ENST00000590627 SLC37A4O43826 429 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 NEMFO60524 1076 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 EIF3JO75822 258 aaKnown RBP18.75■□□□□ 0.59
GCDH-213ENST00000590627 SMPD1P17405 629 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 ITGB5P18084 799 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 NCLP19338 710 aaKnown RBP18.75■□□□□ 0.59
GCDH-213ENST00000590627 ZNF76P36508 570 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 CEBPZQ03701 1054 aaKnown RBP18.75■□□□□ 0.59
GCDH-213ENST00000590627 PTGDRQ13258 359 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 STXBP2Q15833 593 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 TAPT1Q6NXT6 567 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 CXCL17Q6UXB2 119 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 TMEM87AQ8NBN3 555 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 KCNG4Q8TDN1 519 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 TIFAQ96CG3 184 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 MTMR9Q96QG7 549 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 PPP1R12CQ9BZL4 782 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 ZNF576Q9H609 170 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 JADE2Q9NQC1 790 aa18.75■□□□□ 0.59
GCDH-213ENST00000590627 TBX3O15119 743 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 SPTLC2O15270 562 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 DYNC1LI2O43237 492 aaPredicted RBP18.74■□□□□ 0.59
GCDH-213ENST00000590627 PPP6R2O75170 966 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 MYCLP12524 364 aaPredicted RBP18.74■□□□□ 0.59
GCDH-213ENST00000590627 PRPHP41219 470 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 SETQ01105 290 aaPredicted RBP18.74■□□□□ 0.59
GCDH-213ENST00000590627 ITGA7Q13683 1181 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 GRIN2CQ14957 1233 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 STK38Q15208 465 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 CSPP1Q1MSJ5 1256 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 PRR16Q569H4 304 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 ARL6IP4Q66PJ3 421 aaKnown RBP18.74■□□□□ 0.59
GCDH-213ENST00000590627 CYP2W1Q8TAV3 490 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 SPATA32Q96LK8 384 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 INPP4AQ96PE3 977 aaPredicted RBP18.74■□□□□ 0.59
GCDH-213ENST00000590627 KCNMB3Q9NPA1 279 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 PDGFCQ9NRA1 345 aa18.74■□□□□ 0.59
GCDH-213ENST00000590627 MAFGO15525 162 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 FIBPO43427 364 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 PDE4DQ08499 809 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 ZNF365Q70YC5 407 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 FBXO16Q8IX29 292 aaPredicted RBP18.73■□□□□ 0.59
GCDH-213ENST00000590627 ETNPPLQ8TBG4 499 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 GPRASP2Q96D09 838 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 TMEM60Q9H2L4 133 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 IL23AQ9NPF7 189 aa18.73■□□□□ 0.59
GCDH-213ENST00000590627 SPTBN5Q9NRC6 3674 aaKnown RBP18.72■□□□□ 0.59
GCDH-213ENST00000590627 RGS20O76081 388 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 OR52Z1P0C646 297 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 CALCRLQ16602 461 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 EEPD1Q7L9B9 569 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 NLRX1Q86UT6 975 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 PLA2G4DQ86XP0 818 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 POTEDQ86YR6 584 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 HAS1Q92839 578 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 FAM20AQ96MK3 541 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 PBX4Q9BYU1 374 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 MTIF3Q9H2K0 278 aaKnown RBP18.72■□□□□ 0.59
GCDH-213ENST00000590627 HIPK3Q9H422 1215 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 GRIN2DO15399 1336 aa18.72■□□□□ 0.59
GCDH-213ENST00000590627 ACRP10323 421 aa18.71■□□□□ 0.59
GCDH-213ENST00000590627 ICAM3P32942 547 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms