RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 TMC3Q7Z5M5 1100 aa17.27■□□□□ 0.35
MBD1-222ENST00000590208 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.35
MBD1-222ENST00000590208 DZIP3Q86Y13 1208 aaKnown RBP17.27■□□□□ 0.35
MBD1-222ENST00000590208 TRIM6Q9C030 488 aaPredicted RBP17.27■□□□□ 0.35
MBD1-222ENST00000590208 IL17RBQ9NRM6 502 aa17.27■□□□□ 0.35
MBD1-222ENST00000590208 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.27■□□□□ 0.35
MBD1-222ENST00000590208 PAPPAQ13219 1627 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 DCCP43146 1447 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 STXBP3O00186 592 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 LAD1O00515 517 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 TTI1O43156 1089 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 UNC13DQ70J99 1090 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 GUF1Q8N442 669 aaKnown RBP17.26■□□□□ 0.35
MBD1-222ENST00000590208 METTL13Q8N6R0 699 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 CHMP6Q96FZ7 201 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 XPO6Q96QU8 1125 aaKnown RBP17.26■□□□□ 0.35
MBD1-222ENST00000590208 KDM4CQ9H3R0 1056 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 LUC7LQ9NQ29 371 aaKnown RBP17.26■□□□□ 0.35
MBD1-222ENST00000590208 NOC2LQ9Y3T9 749 aaKnown RBP17.26■□□□□ 0.35
MBD1-222ENST00000590208 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 CDC25CP30307 473 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 COBLL1Q53SF7 1204 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 NSMCE1Q8WV22 266 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 CUL5Q93034 780 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 PSMD1Q99460 953 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 MYH4Q9Y623 1939 aa17.26■□□□□ 0.35
MBD1-222ENST00000590208 ROBO1Q9Y6N7 1651 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 TRAF5O00463 557 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 KRIT1O00522 736 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 CAND2O75155 1236 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
MBD1-222ENST00000590208 TFAP4Q01664 338 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 IFFO1Q0D2I5 559 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 TBC1D1Q86TI0 1168 aaPredicted RBP17.25■□□□□ 0.35
MBD1-222ENST00000590208 CALML4Q96GE6 196 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 MTFR1LQ9H019 292 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 PRDM11Q9NQV5 511 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 MAD2L2Q9UI95 211 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 SLIT2O94813 1529 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 F8VZ95 297 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 BUB1BO60566 1050 aaPredicted RBP17.25■□□□□ 0.35
MBD1-222ENST00000590208 FGFR1OPO95684 399 aaKnown RBP17.25■□□□□ 0.35
MBD1-222ENST00000590208 USP11P51784 963 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.25■□□□□ 0.35
MBD1-222ENST00000590208 NUDT12Q9BQG2 462 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 EDEM3Q9BZQ6 932 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 BARHL2Q9NY43 387 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 TBC1D7Q9P0N9 293 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 ATP8A1Q9Y2Q0 1164 aa17.25■□□□□ 0.35
MBD1-222ENST00000590208 LRP5O75197 1615 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
MBD1-222ENST00000590208 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
MBD1-222ENST00000590208 LRRC63Q05C16 580 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 FAM133BQ5BKY9 247 aaKnown RBP17.24■□□□□ 0.35
MBD1-222ENST00000590208 ERMARDQ5T6L9 678 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 CCDC197Q8NCU1 140 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 PNMA5Q96PV4 448 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 DLEC1Q9Y238 1755 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 FAM170AA1A519 330 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 SHBGP04278 402 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 KCNK18Q7Z418 384 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 LARP4BQ92615 738 aaKnown RBP17.24■□□□□ 0.35
MBD1-222ENST00000590208 FGFBP2Q9BYJ0 223 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 COL4A3BPQ9Y5P4 624 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 ADAMTS2O95450 1211 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 GHRP10912 638 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 CHN1P15882 459 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 CCNHP51946 323 aaPredicted RBP17.24■□□□□ 0.35
MBD1-222ENST00000590208 PTK2Q05397 1052 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 ARMC9Q7Z3E5 817 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 EIF1ADQ8N9N8 165 aaKnown RBP17.24■□□□□ 0.35
MBD1-222ENST00000590208 TRIM51Q9BSJ1 452 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 GGT7Q9UJ14 662 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 ABCB11O95342 1321 aa17.24■□□□□ 0.35
MBD1-222ENST00000590208 CACNA1SQ13698 1873 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 SMIM23A6NLE4 172 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 PGRMC1O00264 195 aaKnown RBP17.23■□□□□ 0.35
MBD1-222ENST00000590208 PPP1R12AO14974 1030 aaPredicted RBP17.23■□□□□ 0.35
MBD1-222ENST00000590208 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 CCDC63Q8NA47 563 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 ACTRT1Q8TDG2 376 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 DDX12PQ92771 950 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 ZNF317Q96PQ6 595 aaPredicted RBP17.23■□□□□ 0.35
MBD1-222ENST00000590208 NR2E1Q9Y466 385 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 POTEMA6NI47 508 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 BHMG1C9JSJ3 638 aaPredicted RBP17.23■□□□□ 0.35
MBD1-222ENST00000590208 ACTN1P12814 892 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 MTMR3Q13615 1198 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 NELFCDQ8IXH7 590 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 DAGLBQ8NCG7 672 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 SYN2Q92777 582 aaPredicted RBP17.23■□□□□ 0.35
MBD1-222ENST00000590208 SELENOSQ9BQE4 189 aa17.23■□□□□ 0.35
MBD1-222ENST00000590208 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.23■□□□□ 0.357e-7■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms