RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 AFPP02771 609 aaKnown RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 MCF2L2Q86YR7 1114 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 GSPT2Q8IYD1 628 aaKnown RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 TAB3Q8N5C8 712 aaPredicted RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 AGBL1Q96MI9 1066 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 hCG_1984214I3L0E3 225 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 R3HDM1Q15032 1099 aaKnown RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 LONRF2Q1L5Z9 754 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 HHIPL2Q6UWX4 724 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 PAF1Q8N7H5 531 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 ZNF713Q8N859 430 aaPredicted RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 DEPTORQ8TB45 409 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 VTI1AQ96AJ9 217 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 PCDHA13Q9Y5I0 950 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 HGSO14964 777 aaPredicted RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 TFRCP02786 760 aaKnown RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 MYL1P05976 194 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 BCRP11274 1271 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 HMGCS2P54868 508 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
RETREG3-208ENST00000589797 PAIP2Q9BPZ3 127 aaKnown RBP15.96■□□□□ 0.15
RETREG3-208ENST00000589797 ACTN1P12814 892 aa15.96■□□□□ 0.14
RETREG3-208ENST00000589797 LIG4P49917 911 aa15.96■□□□□ 0.14
RETREG3-208ENST00000589797 POLGP54098 1239 aaPredicted RBP15.96■□□□□ 0.14
RETREG3-208ENST00000589797 GUCY2DQ02846 1103 aa15.96■□□□□ 0.14
RETREG3-208ENST00000589797 PPP1R7Q15435 360 aa15.96■□□□□ 0.14
RETREG3-208ENST00000589797 EIF2AK1Q9BQI3 630 aaKnown RBP15.96■□□□□ 0.14
RETREG3-208ENST00000589797 ZC2HC1CQ53FD0 456 aaPredicted RBP15.95■□□□□ 0.14
RETREG3-208ENST00000589797 RNF207Q6ZRF8 634 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 KRT12Q99456 494 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 ZNF70Q9UC06 446 aaPredicted RBP15.95■□□□□ 0.14
RETREG3-208ENST00000589797 MRC1P22897 1456 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 GCLMP48507 274 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 MESDQ14696 234 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 WHAMMP3Q1A5X7 153 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 NBPF9Q3BBW0 867 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 KCTD16Q68DU8 428 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 WDR11Q9BZH6 1224 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 UBE2TQ9NPD8 197 aaPredicted RBP15.95■□□□□ 0.14
RETREG3-208ENST00000589797 ST7Q9NRC1 585 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 PHLPP2Q6ZVD8 1323 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 PSMC2P35998 433 aaKnown RBP15.95■□□□□ 0.14
RETREG3-208ENST00000589797 MTMR1Q13613 665 aa15.95■□□□□ 0.14
RETREG3-208ENST00000589797 PLEKP08567 350 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-208ENST00000589797 RHBDL3P58872 404 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 LRRC63Q05C16 580 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 MTMR2Q13614 643 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 GNPTABQ3T906 1256 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 OTUD6AQ7L8S5 288 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 DNAAF5Q86Y56 855 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 TRPC6Q9Y210 931 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 ADAMTS3O15072 1205 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 ZNF185O15231 689 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 SLC16A4O15374 487 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 TM4SF1P30408 202 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 SNRNP48Q6IEG0 339 aaKnown RBP15.94■□□□□ 0.14
RETREG3-208ENST00000589797 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-208ENST00000589797 RABGGTAQ92696 567 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 METTL14Q9HCE5 456 aaKnown RBP15.94■□□□□ 0.14
RETREG3-208ENST00000589797 GOLGA6BA6NDN3 693 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 RSPH10B2B2RC85 870 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 RSPH10BP0C881 870 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 SETQ01105 290 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-208ENST00000589797 DMP1Q13316 513 aaPredicted RBP15.94■□□□□ 0.14
RETREG3-208ENST00000589797 TRPC3Q13507 836 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 GPR162Q16538 588 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 TTC16Q8NEE8 873 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 SMARCAL1Q9NZC9 954 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 EXOC7Q9UPT5 735 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 DUSP10Q9Y6W6 482 aa15.94■□□□□ 0.14
RETREG3-208ENST00000589797 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
RETREG3-208ENST00000589797 KRIT1O00522 736 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 SHMT1P34896 483 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 APOBEC3HQ6NTF7 200 aaKnown RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 ZNF746Q6NUN9 644 aaPredicted RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 ALKBH5Q6P6C2 394 aaKnown RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 IVNS1ABPQ9Y6Y0 642 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 NR3C1P04150 777 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 IL1R1P14778 569 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 ATP1A2P50993 1020 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 AP3B2Q13367 1082 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 CYFIP1Q7L576 1253 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 MPHOSPH6Q99547 160 aaKnown RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 AP1M1Q9BXS5 423 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 AS3MTQ9HBK9 375 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 PVALEFA0A1B0GWK0 134 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 RHOBTB3O94955 611 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 PNMA6AP0CW24 399 aaPredicted RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 PADI6Q6TGC4 694 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 MICALL2Q8IY33 904 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 GUF1Q8N442 669 aaKnown RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 ZNF526Q8TF50 670 aaPredicted RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 DCPSQ96C86 337 aaKnown RBP15.93■□□□□ 0.14
RETREG3-208ENST00000589797 SELENOSQ9BQE4 189 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 LXNQ9BS40 222 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 GOLPH3Q9H4A6 298 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 KMT5AQ9NQR1 393 aa15.93■□□□□ 0.14
RETREG3-208ENST00000589797 MYL7Q01449 175 aa15.92■□□□□ 0.14
RETREG3-208ENST00000589797 CEP55Q53EZ4 464 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms