RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
CCBE1-203ENST00000589116 PDE4DQ08499 809 aa13.47□□□□□ -0.25
CCBE1-203ENST00000589116 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
CCBE1-203ENST00000589116 CDHR1Q96JP9 859 aa13.47□□□□□ -0.25
CCBE1-203ENST00000589116 HSD17B14Q9BPX1 270 aa13.47□□□□□ -0.25
CCBE1-203ENST00000589116 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
CCBE1-203ENST00000589116 MOV10L1Q9BXT6 1211 aaKnown RBP13.47□□□□□ -0.25
CCBE1-203ENST00000589116 UNC45AQ9H3U1 944 aa13.47□□□□□ -0.25
CCBE1-203ENST00000589116 E9PMD0 336 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.26
CCBE1-203ENST00000589116 PAK1Q13153 545 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 DHX8Q14562 1220 aaKnown RBP13.46□□□□□ -0.26
CCBE1-203ENST00000589116 ANKRD23Q86SG2 305 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 NCAPG2Q86XI2 1143 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 SMYD4Q8IYR2 804 aaPredicted RBP13.46□□□□□ -0.26
CCBE1-203ENST00000589116 SHCBP1Q8NEM2 672 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 DDX12PQ92771 950 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 MS4A4AQ96JQ5 239 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 HSD3B7Q9H2F3 369 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 SAGE1Q9NXZ1 904 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 RBPJLQ9UBG7 517 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 ADD3Q9UEY8 706 aaKnown RBP13.46□□□□□ -0.26
CCBE1-203ENST00000589116 TCEAL9Q9UHQ7 104 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 RWDD2AQ9UIY3 292 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 KIAA1217Q5T5P2 1943 aa13.46□□□□□ -0.26
CCBE1-203ENST00000589116 CCL15-CCL14A0A0B4J2E2 113 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 TESPA1A2RU30 521 aaPredicted RBP13.45□□□□□ -0.26
CCBE1-203ENST00000589116 GOLGA6L6A8MZA4 724 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 B4DLN1 442 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 CHMP2AO43633 222 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 EYA4O95677 639 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 SLC12A3P55017 1021 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 PSMD2Q13200 908 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 CCL15Q16663 113 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 GNPTABQ3T906 1256 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 SPRYD7Q5W111 196 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 CTU1Q7Z7A3 348 aaKnown RBP13.45□□□□□ -0.26
CCBE1-203ENST00000589116 ADSSL1Q8N142 457 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 SYT2Q8N9I0 419 aaPredicted RBP13.45□□□□□ -0.26
CCBE1-203ENST00000589116 RDM1Q8NG50 284 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 ZFP91Q96JP5 570 aaPredicted RBP13.45□□□□□ -0.26
CCBE1-203ENST00000589116 PURBQ96QR8 312 aaKnown RBP13.45□□□□□ -0.26
CCBE1-203ENST00000589116 ZIC5Q96T25 663 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 MROH8Q9H579 483 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 GDAQ9Y2T3 454 aa13.45□□□□□ -0.26
CCBE1-203ENST00000589116 PSMA7O14818 248 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 SLITRK3O94933 977 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 ZNF18P17022 549 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 CYP11B2P19099 503 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 ERCC3P19447 782 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 SFNP31947 248 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 PRCPP42785 496 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 JAK3P52333 1124 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 KRT76Q01546 638 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 CYP4A11Q02928 519 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 EHHADHQ08426 723 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 ITGB3BPQ13352 177 aaPredicted RBP13.44□□□□□ -0.26
CCBE1-203ENST00000589116 KLHL10Q6JEL2 608 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 MIER3Q7Z3K6 550 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 GPBP1Q86WP2 473 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 CCDC65Q8IXS2 484 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 DNAJC19Q96DA6 116 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 DHTKD1Q96HY7 919 aaPredicted RBP13.44□□□□□ -0.26
CCBE1-203ENST00000589116 DYDC2Q96IM9 177 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 MED15Q96RN5 788 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 TXNRD2Q9NNW7 524 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 FANCLQ9NW38 375 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 CTNND2Q9UQB3 1225 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 LRRC37A2A6NM11 1700 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 CBFA2T2O43439 604 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 SSBP05455 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCBE1-203ENST00000589116 PTMAP06454 111 aaKnown RBP13.44□□□□□ -0.26
CCBE1-203ENST00000589116 ALDH5A1P51649 535 aaPredicted RBP13.44□□□□□ -0.26
CCBE1-203ENST00000589116 ERVK-9P63128 1117 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 ERVK-24P63145 666 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 CCNA1P78396 465 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 STXBP2Q15833 593 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 DYMQ7RTS9 669 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 TRMT44Q8IYL2 757 aaKnown RBP13.44□□□□□ -0.26
CCBE1-203ENST00000589116 FAM133AQ8N9E0 248 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 NACC1Q96RE7 527 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 MPHOSPH6Q99547 160 aaKnown RBP13.44□□□□□ -0.26
CCBE1-203ENST00000589116 RGL1Q9NZL6 768 aa13.44□□□□□ -0.26
CCBE1-203ENST00000589116 NFASCO94856 1347 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 LOC102724159A0A0B4J2E5 919 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 FRMD3A2A2Y4 597 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 PDHXO00330 501 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 EIF3JO75822 258 aaKnown RBP13.43□□□□□ -0.26
CCBE1-203ENST00000589116 TPM3P06753 285 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 P4HBP07237 508 aaKnown RBP13.43□□□□□ -0.26
CCBE1-203ENST00000589116 IDEP14735 1019 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 EDNRBP24530 442 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 ICAM3P32942 547 aa13.43□□□□□ -0.26
CCBE1-203ENST00000589116 GCLCP48506 637 aaPredicted RBP13.43□□□□□ -0.26
CCBE1-203ENST00000589116 HUNKP57058 714 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms