RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 LRCH2Q5VUJ6 765 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SLC30A10Q6XR72 485 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 GPBP1Q86WP2 473 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SULF1Q8IWU6 871 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 DDX12PQ92771 950 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SLC5A5Q92911 643 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 P2RX5Q93086 422 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 HPS3Q969F9 1004 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 WNK4Q96J92 1243 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 CTAGE1Q96RT6 745 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SLC39A2Q9NP94 309 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 SPTLC3Q9NUV7 552 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 COL20A1Q9P218 1284 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 LIMA1Q9UHB6 759 aaKnown RBP9.77□□□□□ -0.85
SMAD4-206ENST00000588860 RABGAP1Q9Y3P9 1069 aa9.77□□□□□ -0.85
SMAD4-206ENST00000588860 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 EML1O00423 815 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 MEIS1O00470 390 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 CHMP2AO43633 222 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 NRDCO43847 1150 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 KRT18P05783 430 aaKnown RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 SPATA31C1P0DKV0 1188 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 ARP10275 920 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 SKILP12757 684 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 CCNE1P24864 410 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 RPA1P27694 616 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 HOXA7P31268 230 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 COPB1P53618 953 aaKnown RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 PMS1P54277 932 aaKnown RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 GHRHRQ02643 423 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 CYP4A11Q02928 519 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 COASYQ13057 564 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 VGLL4Q14135 290 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 NR1I3Q14994 352 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 DEFB115Q30KQ5 88 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 COBLL1Q53SF7 1204 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 TCP11X2Q5H9J9 407 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 SPECC1LQ69YQ0 1117 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 TTI2Q6NXR4 508 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 DLK2Q6UY11 383 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 APTXQ7Z2E3 356 aaKnown RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 KRT26Q7Z3Y9 468 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 CATSPER3Q86XQ3 398 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 CREBRFQ8IUR6 639 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 CCDC65Q8IXS2 484 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 SAMD3Q8N6K7 520 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 KIAA0895Q8NCT3 520 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 IL31RAQ8NI17 732 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 SYTL5Q8TDW5 730 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 NOC3LQ8WTT2 800 aaKnown RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 EIF2AK1Q9BQI3 630 aaKnown RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 MXRA8Q9BRK3 442 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 ZNF577Q9BSK1 485 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 POLR3CQ9BUI4 534 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 MCOLN1Q9GZU1 580 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 THAP9Q9H5L6 903 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 RNF146Q9NTX7 359 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 PANK4Q9NVE7 773 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 TAB2Q9NYJ8 693 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 MAGEC2Q9UBF1 373 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-206ENST00000588860 DNM3Q9UQ16 869 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 AFG3L2Q9Y4W6 797 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 CSADQ9Y600 493 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 SNCAIPQ9Y6H5 919 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 FRMPD4Q14CM0 1322 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 PASKQ96RG2 1323 aa9.76□□□□□ -0.85
SMAD4-206ENST00000588860 TEX33O43247 280 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 PSMD10O75832 226 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 EIF2AK2P19525 551 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 SLC12A3P55017 1021 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 GOLGA8FQ08AF8 430 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 GOLGA8DPQ0D2H9 430 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 PSMD2Q13200 908 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 PABPC4Q13310 644 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 PPP2R5CQ13362 524 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 COG2Q14746 738 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 DNTTIP2Q5QJE6 756 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 PCNX4Q63HM2 1172 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 ANKRD40Q6AI12 368 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 SNRNP48Q6IEG0 339 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 NSMFQ6X4W1 530 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 RNF207Q6ZRF8 634 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 CATSPERGQ6ZRH7 1159 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 NIPA1Q7RTP0 329 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 FAM114A1Q8IWE2 563 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 CSGALNACT2Q8N6G5 542 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 REPS2Q8NFH8 660 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 DNAJC19Q96DA6 116 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 DYDC2Q96IM9 177 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 TAAR1Q96RJ0 339 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 DUSP9Q99956 384 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 BEGAINQ9BUH8 593 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 TEKT3Q9BXF9 490 aa9.75□□□□□ -0.85
SMAD4-206ENST00000588860 SRRTQ9BXP5 876 aaKnown RBP9.75□□□□□ -0.85
SMAD4-206ENST00000588860 WDR11Q9BZH6 1224 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms