RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 CCDC149Q6ZUS6 474 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 PRPF38AQ8NAV1 312 aaKnown RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 RSAD2Q8WXG1 361 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 KAT2BQ92831 832 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 KLHL5Q96PQ7 755 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 OSBPL6Q9BZF3 934 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 ACAD9Q9H845 621 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 A1CFQ9NQ94 594 aaKnown RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 AAASQ9NRG9 546 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 HOMER2Q9NSB8 354 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 HMG20BQ9P0W2 317 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 KLK13Q9UKR3 277 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 PCDHB12Q9Y5F1 795 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 UBR5O95071 2799 aaPredicted RBP8.39□□□□□ -1.07
TPM4-210ENST00000588507 MYH1P12882 1939 aa8.39□□□□□ -1.07
TPM4-210ENST00000588507 CAPN8A6NHC0 703 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 RAD21O60216 631 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 ZNF806P0C7X5 589 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 CEACAM1P13688 526 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 PPP2R5BQ15173 497 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 PTPN14Q15678 1187 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 SH3PXD2AQ5TCZ1 1133 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 RNF43Q68DV7 783 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 CLEC10AQ8IUN9 316 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 CCDC146Q8IYE0 955 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 C12orf76Q8N812 135 aaPredicted RBP8.38□□□□□ -1.07
TPM4-210ENST00000588507 ZNF513Q8N8E2 541 aaPredicted RBP8.38□□□□□ -1.07
TPM4-210ENST00000588507 SPATA5Q8NB90 893 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 LSM14AQ8ND56 463 aaKnown RBP8.38□□□□□ -1.07
TPM4-210ENST00000588507 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 ALG1Q9BT22 464 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 OSBPL7Q9BZF2 842 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 TMEM260Q9NX78 707 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 HCFC2Q9Y5Z7 792 aa8.38□□□□□ -1.07
TPM4-210ENST00000588507 FAM170BA6NMN3 283 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 HIDE1A8MVS5 230 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 F5H6K3 240 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 ENPP3O14638 875 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 LILRB3O75022 631 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 FGF18O76093 207 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 CASTP20810 708 aaKnown RBP8.37□□□□□ -1.07
TPM4-210ENST00000588507 PSEN2P49810 448 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 OAZ1P54368 228 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 DYNLL1P63167 89 aaKnown RBP8.37□□□□□ -1.07
TPM4-210ENST00000588507 UBXN2BQ14CS0 331 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 PAN2Q504Q3 1202 aaKnown RBP8.37□□□□□ -1.07
TPM4-210ENST00000588507 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 LRRC47Q8N1G4 583 aaKnown RBP8.37□□□□□ -1.07
TPM4-210ENST00000588507 COPS5Q92905 334 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 TCF25Q9BQ70 676 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 SRCIN1Q9C0H9 1055 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 NGRNQ9NPE2 291 aaKnown RBP8.37□□□□□ -1.07
TPM4-210ENST00000588507 ENTPD7Q9NQZ7 604 aa8.37□□□□□ -1.07
TPM4-210ENST00000588507 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.37□□□□□ -1.07
TPM4-210ENST00000588507 KIAA1671Q9BY89 1806 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 RFX5P48382 616 aaPredicted RBP8.36□□□□□ -1.07
TPM4-210ENST00000588507 TIMM10P62072 90 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 GABPAQ06546 454 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 APOBRQ0VD83 1088 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 SCAPQ12770 1279 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 MVPQ14764 893 aaKnown RBP8.36□□□□□ -1.07
TPM4-210ENST00000588507 TWISTNBQ3B726 338 aaPredicted RBP8.36□□□□□ -1.07
TPM4-210ENST00000588507 KANK3Q6NY19 840 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 PI16Q6UXB8 463 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 RASGRP2Q7LDG7 609 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 ADGRA1Q86SQ6 560 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 DHX37Q8IY37 1157 aaKnown RBP8.36□□□□□ -1.07
TPM4-210ENST00000588507 DDX23Q9BUQ8 820 aaKnown RBP8.36□□□□□ -1.07
TPM4-210ENST00000588507 KATNAL1Q9BW62 490 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 SLC38A10Q9HBR0 1119 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 SLC2A4RGQ9NR83 387 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 DZANK1Q9NVP4 752 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 PUF60Q9UHX1 559 aaKnown RBP8.36□□□□□ -1.07
TPM4-210ENST00000588507 FBXO3Q9UK99 471 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 LZTS1Q9Y250 596 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 MTF2Q9Y483 593 aaPredicted RBP8.36□□□□□ -1.07
TPM4-210ENST00000588507 GREB1Q4ZG55 1949 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 TTC3P53804 2025 aa8.36□□□□□ -1.07
TPM4-210ENST00000588507 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 IL16Q14005 1332 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 MYH7BA7E2Y1 1941 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 APC2O95996 2303 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 FAM221BA6H8Z2 402 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 NCAM2O15394 837 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 CAND2O75155 1236 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 CIAO1O76071 339 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 WISP1O95388 367 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 POLR3DP05423 398 aaPredicted RBP8.35□□□□□ -1.07
TPM4-210ENST00000588507 TDGF1P13385 188 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 EEF2P13639 858 aaKnown RBP8.35□□□□□ -1.07
TPM4-210ENST00000588507 CSRP1P21291 193 aaKnown RBP8.35□□□□□ -1.07
TPM4-210ENST00000588507 MFSD10Q14728 455 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 PPP2R5DQ14738 602 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 ZBTB41Q5SVQ8 909 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 SPOUT1Q5T280 376 aaKnown RBP8.35□□□□□ -1.07
TPM4-210ENST00000588507 DAB2IPQ5VWQ8 1189 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 THNSL1Q8IYQ7 743 aa8.35□□□□□ -1.07
TPM4-210ENST00000588507 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
TPM4-210ENST00000588507 CLDN23Q96B33 292 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms