RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 USP17L6PQ6QN14 398 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 TMEM179Q6ZVK1 233 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 ETNPPLQ8TBG4 499 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 AENQ8WTP8 325 aaKnown RBP21.84■■□□□ 1.09
MBD1-216ENST00000587605 GMCL1Q96IK5 515 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 MXD3Q9BW11 206 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 RNF216Q9NWF9 866 aaPredicted RBP21.84■■□□□ 1.09
MBD1-216ENST00000587605 AFF2P51816 1311 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 KIF13BQ9NQT8 1826 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 RPA1P27694 616 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 MMP14P50281 582 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 GYS2P54840 703 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 NFIAQ12857 509 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 FRMD5Q7Z6J6 570 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 SELENOOQ9BVL4 669 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 DNAJC18Q9H819 358 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 SYNPO2Q9UMS6 1093 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 DNM3Q9UQ16 869 aa21.84■■□□□ 1.09
MBD1-216ENST00000587605 MEIS2O14770 477 aa21.83■■□□□ 1.09
MBD1-216ENST00000587605 ANXA13P27216 316 aa21.83■■□□□ 1.09
MBD1-216ENST00000587605 GFPT1Q06210 699 aaPredicted RBP21.83■■□□□ 1.09
MBD1-216ENST00000587605 ADAM9Q13443 819 aa21.83■■□□□ 1.09
MBD1-216ENST00000587605 SLC18A3Q16572 532 aa21.83■■□□□ 1.09
MBD1-216ENST00000587605 TATDN1Q6P1N9 297 aa21.83■■□□□ 1.09
MBD1-216ENST00000587605 PLCB1Q9NQ66 1216 aa21.83■■□□□ 1.09
MBD1-216ENST00000587605 TRAF3IP3Q9Y228 551 aa21.83■■□□□ 1.09
MBD1-216ENST00000587605 BTNL10A8MVZ5 291 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 MED24O75448 989 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 CLSTN1O94985 981 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 SREBF1P36956 1147 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 POLR2FP61218 127 aaKnown RBP21.82■■□□□ 1.08
MBD1-216ENST00000587605 RASSF7Q02833 373 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 TRAF1Q13077 416 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 NAB2Q15742 525 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 NELFCDQ8IXH7 590 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 SYT2Q8N9I0 419 aaPredicted RBP21.82■■□□□ 1.08
MBD1-216ENST00000587605 MASTLQ96GX5 879 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 NLRC4Q9NPP4 1024 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 BZW2Q9Y6E2 419 aaKnown RBP21.82■■□□□ 1.08
MBD1-216ENST00000587605 ATP8B3O60423 1300 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 CALUO43852 315 aaPredicted RBP21.82■■□□□ 1.08
MBD1-216ENST00000587605 RNF40O75150 1001 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 CAPN2P17655 700 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 CIITAP33076 1130 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 ICA1Q05084 483 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 SPIRE1Q08AE8 756 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 ASIC2Q16515 512 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 CFAP221Q4G0U5 840 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 FBXO11Q86XK2 927 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 TBC1D7Q9P0N9 293 aa21.82■■□□□ 1.08
MBD1-216ENST00000587605 GRID2IPA4D2P6 1211 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 SPDYE3A6NKU9 549 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 TLR2O60603 784 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 SYF2O95926 243 aaKnown RBP21.81■■□□□ 1.08
MBD1-216ENST00000587605 ARSHQ5FYA8 562 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 STRIP1Q5VSL9 837 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 KLHDC7AQ5VTJ3 777 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 NFRKBQ6P4R8 1299 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 AFAP1L1Q8TED9 768 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 GJA10Q969M2 543 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 DRC1Q96MC2 740 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 TLR10Q9BXR5 811 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 GANQ9H2C0 597 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 ZC3H4Q9UPT8 1303 aaKnown RBP21.81■■□□□ 1.08
MBD1-216ENST00000587605 MYH10P35580 1976 aa21.81■■□□□ 1.08
MBD1-216ENST00000587605 EPHB4P54760 987 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 GIT2Q14161 759 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 KNOP1Q1ED39 458 aaKnown RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 BMT2Q1RMZ1 405 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 EMBQ6PCB8 327 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 EPM2AIP1Q7L775 607 aaPredicted RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 FGFBP2Q9BYJ0 223 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 METTL14Q9HCE5 456 aaKnown RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 PDXKO00764 312 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 SLC16A3O15427 465 aaKnown RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 PRPF6O94906 941 aaKnown RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 NR2F2P24468 414 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 KLHL30Q0D2K2 578 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 NNTQ13423 1086 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 SF3B2Q13435 895 aaKnown RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 PRR16Q569H4 304 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 SYDE2Q5VT97 1194 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 CATSPER3Q86XQ3 398 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 POLR3CQ9BUI4 534 aaPredicted RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 FAM204AQ9H8W3 233 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 STIM2Q9P246 746 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 PCDHGC5Q9Y5F6 944 aa21.8■■□□□ 1.08
MBD1-216ENST00000587605 COL2A1P02458 1487 aaPredicted RBP21.8■■□□□ 1.08
MBD1-216ENST00000587605 NPHP3-ACAD11A0A0J9YXS1 232 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 POTEFA5A3E0 1075 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 CES2O00748 559 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 POTEIP0CG38 1075 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 RPL13P26373 211 aaKnown RBP21.79■■□□□ 1.08
MBD1-216ENST00000587605 NAP1L1P55209 391 aaKnown RBP21.79■■□□□ 1.08
MBD1-216ENST00000587605 KCNH2Q12809 1159 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 RAPGEF1Q13905 1077 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 POTEGQ6S5H5 508 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 POTEEQ6S8J3 1075 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 BTNL9Q6UXG8 535 aa21.79■■□□□ 1.08
MBD1-216ENST00000587605 ZFPM1Q8IX07 1006 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms