RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 KATNAL1Q9BW62 490 aa24.27■■□□□ 1.48
RETREG3-202ENST00000585726 PRDM5Q9NQX1 630 aaPredicted RBP24.27■■□□□ 1.48
RETREG3-202ENST00000585726 PCDH10Q9P2E7 1040 aa24.27■■□□□ 1.48
RETREG3-202ENST00000585726 ZMYND8Q9ULU4 1186 aaPredicted RBP24.27■■□□□ 1.48
RETREG3-202ENST00000585726 DCDC2CA8MYV0 355 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 H3BRB1 525 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 CHMP2AO43633 222 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 SYN1P17600 705 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 U2AF2P26368 475 aaKnown RBP eCLIP24.26■■□□□ 1.478e-7■■■■□ 26.3
RETREG3-202ENST00000585726 SLC43A3Q8NBI5 491 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 ETNPPLQ8TBG4 499 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 GLG1Q92896 1179 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 TEKT3Q9BXF9 490 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 TUT1Q9H6E5 874 aaKnown RBP24.26■■□□□ 1.47
RETREG3-202ENST00000585726 NOL7Q9UMY1 257 aaKnown RBP24.26■■□□□ 1.47
RETREG3-202ENST00000585726 SAMM50Q9Y512 469 aa24.26■■□□□ 1.47
RETREG3-202ENST00000585726 ALPK3Q96L96 1907 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 PDCP20941 246 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 MARK3P27448 753 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 MCM7P33993 719 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 ZNF174Q15697 407 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 ANKRD33Q7Z3H0 272 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 C7orf31Q8N865 590 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 RIT2Q99578 217 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 MROH7Q68CQ1 1323 aa24.25■■□□□ 1.47
RETREG3-202ENST00000585726 BACH1O14867 736 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 TLR3O15455 904 aaKnown RBP24.24■■□□□ 1.47
RETREG3-202ENST00000585726 KRT76Q01546 638 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 ZNF746Q6NUN9 644 aaPredicted RBP24.24■■□□□ 1.47
RETREG3-202ENST00000585726 MIS18BP1Q6P0N0 1132 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 NFRKBQ6P4R8 1299 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 FAM126BQ8IXS8 530 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 TRPV6Q9H1D0 765 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 UNC45AQ9H3U1 944 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 AZI2Q9H6S1 392 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 HDAC6Q9UBN7 1215 aa24.24■■□□□ 1.47
RETREG3-202ENST00000585726 ZNF215Q9UL58 517 aaPredicted RBP24.24■■□□□ 1.47
RETREG3-202ENST00000585726 HAS3O00219 553 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 B4GALT4O60513 344 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 NEMFO60524 1076 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 PSMD10O75832 226 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 CLTBP09497 229 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 SUPT20HL2P0C7V6 817 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 SYT1P21579 422 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 FAAP100Q0VG06 881 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 NBR1Q14596 966 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 CALCRLQ16602 461 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 TTC38Q5R3I4 469 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 ABHD15Q6UXT9 468 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 SH3RF1Q7Z6J0 888 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 HAS1Q92839 578 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 TOX2Q96NM4 488 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 PCYT2Q99447 389 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 SEZ6LQ9BYH1 1024 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 SMARCAD1Q9H4L7 1026 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 KCNMB3Q9NPA1 279 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 TRMT13Q9NUP7 481 aaKnown RBP24.23■■□□□ 1.47
RETREG3-202ENST00000585726 TMEM39AQ9NV64 488 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 PRKAG2Q9UGJ0 569 aa24.23■■□□□ 1.47
RETREG3-202ENST00000585726 H0YGN5 161 aa24.22■■□□□ 1.47
RETREG3-202ENST00000585726 ATG7O95352 703 aa24.22■■□□□ 1.47
RETREG3-202ENST00000585726 BAG4O95429 457 aaKnown RBP24.22■■□□□ 1.47
RETREG3-202ENST00000585726 SWSAP1Q6NVH7 229 aa24.22■■□□□ 1.47
RETREG3-202ENST00000585726 FAM20AQ96MK3 541 aa24.22■■□□□ 1.47
RETREG3-202ENST00000585726 RNPEPQ9H4A4 650 aa24.22■■□□□ 1.47
RETREG3-202ENST00000585726 PDLIM7Q9NR12 457 aa24.22■■□□□ 1.47
RETREG3-202ENST00000585726 TBX3O15119 743 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 LGR5O75473 907 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 PSAPP07602 524 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 STAT5BP51692 787 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 MIER3Q7Z3K6 550 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 FERMT3Q86UX7 667 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 SMAP1Q8IYB5 467 aaPredicted RBP24.21■■□□□ 1.47
RETREG3-202ENST00000585726 DISC1Q9NRI5 854 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 ERAP1Q9NZ08 941 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 PCDHA10Q9Y5I2 948 aa24.21■■□□□ 1.47
RETREG3-202ENST00000585726 TNRC18O15417 2968 aaPredicted RBP24.21■■□□□ 1.47
RETREG3-202ENST00000585726 DNAH12Q6ZR08 3092 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 EMSYQ7Z589 1322 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 WDR64B1ANS9 1081 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 CD4P01730 458 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 SMIM10L2AP0DMW4 78 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 SMIM10L2BP0DMW5 78 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 TRAPPC10P48553 1259 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 TOB1P50616 345 aaPredicted RBP24.2■■□□□ 1.46
RETREG3-202ENST00000585726 PTPN11Q06124 597 aaPredicted RBP24.2■■□□□ 1.46
RETREG3-202ENST00000585726 FAM160B1Q5W0V3 765 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 GDF6Q6KF10 455 aaPredicted RBP24.2■■□□□ 1.46
RETREG3-202ENST00000585726 CCDC60Q8IWA6 550 aaPredicted RBP24.2■■□□□ 1.46
RETREG3-202ENST00000585726 SLFN12Q8IYM2 578 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 TMEM60Q9H2L4 133 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 ZNF302Q9NR11 478 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 GTF2IRD1Q9UHL9 959 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 NOD1Q9Y239 953 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 SCN10AQ9Y5Y9 1956 aa24.2■■□□□ 1.46
RETREG3-202ENST00000585726 TRIM43BA6NCK2 446 aa24.19■■□□□ 1.46
RETREG3-202ENST00000585726 CYP2C9P11712 490 aa24.19■■□□□ 1.46
RETREG3-202ENST00000585726 TXKP42681 527 aa24.19■■□□□ 1.46
RETREG3-202ENST00000585726 ZNF200P98182 395 aaPredicted RBP24.19■■□□□ 1.46
RETREG3-202ENST00000585726 PTGISQ16647 500 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms