RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 C11orf49Q9H6J7 331 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
ERBB2-216ENST00000584014 Q9Y3F1 56 aa9.43□□□□□ -0.9
ERBB2-216ENST00000584014 CYP3A7-CYP3A51PA0A087WV96 503 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 OR52Z1P0C646 297 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 CYP3A7P24462 503 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 TECP42680 631 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 ACTR2P61160 394 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 PTGDRQ13258 359 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 ZRSR1Q15695 479 aaKnown RBP9.42□□□□□ -0.9
ERBB2-216ENST00000584014 PPP4R3AQ6IN85 833 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 SWSAP1Q6NVH7 229 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 MOXD1Q6UVY6 613 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 MIER3Q7Z3K6 550 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 TRIM50Q86XT4 487 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 SLFN12Q8IYM2 578 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 PPTC7Q8NI37 304 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 SEPT1Q8WYJ6 367 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 SLC5A5Q92911 643 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 LENG9Q96B70 501 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 GPR20Q99678 358 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 SENP7Q9BQF6 1050 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 MTG1Q9BT17 334 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-216ENST00000584014 CRISPLD2Q9H0B8 497 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 UPF3AQ9H1J1 476 aaKnown RBP9.42□□□□□ -0.9
ERBB2-216ENST00000584014 TMEM60Q9H2L4 133 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 ZSCAN16Q9H4T2 348 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-216ENST00000584014 AZI2Q9H6S1 392 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 TTC12Q9H892 705 aaPredicted RBP9.42□□□□□ -0.9
ERBB2-216ENST00000584014 STARD7Q9NQZ5 370 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 PCDHA12Q9UN75 941 aa9.42□□□□□ -0.9
ERBB2-216ENST00000584014 NFASCO94856 1347 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 ELP1O95163 1332 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 A0A1W2PQ45 241 aaPredicted RBP9.41□□□□□ -0.9
ERBB2-216ENST00000584014 GSTTP1A0A1W2PQM5 241 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 A0A1W2PQY0 241 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 A6NJR5 290 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 CTAGE5O15320 804 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 PPFIA4O75335 1185 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 CCNE2O96020 404 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 F13A1P00488 732 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 LGALS2P05162 132 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 PSAPP07602 524 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 TRAPPC10P48553 1259 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 KRT76Q01546 638 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 SF3A1Q15459 793 aaKnown RBP9.41□□□□□ -0.9
ERBB2-216ENST00000584014 TMEM266Q2M3C6 531 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 MIS18BP1Q6P0N0 1132 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 KLHDC9Q8NEP7 349 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 ETNPPLQ8TBG4 499 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 DPF3Q92784 378 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 ZNF396Q96N95 335 aaPredicted RBP9.41□□□□□ -0.9
ERBB2-216ENST00000584014 FTOQ9C0B1 505 aaKnown RBP eCLIP9.41□□□□□ -0.9
ERBB2-216ENST00000584014 UNC45AQ9H3U1 944 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 CLIC4Q9Y696 253 aa9.41□□□□□ -0.9
ERBB2-216ENST00000584014 KIAA0100Q14667 2235 aaKnown RBP9.41□□□□□ -0.9
ERBB2-216ENST00000584014 VWA3AA6NCI4 1184 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 MOXD2PA6NHM9 499 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 H3BRB1 525 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 DHX15O43143 795 aaKnown RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 KPNA6O60684 536 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 PQBP1O60828 265 aaKnown RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 PSMD10O75832 226 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 MARCKSP29966 332 aaPredicted RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 PSEN2P49810 448 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 IGBP1P78318 339 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 PURAQ00577 322 aaKnown RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 CYP4A11Q02928 519 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 ITGA7Q13683 1181 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 MFSD10Q14728 455 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 STK38Q15208 465 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 KIAA0753Q2KHM9 967 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 FAM160B1Q5W0V3 765 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 DTHD1Q6ZMT9 781 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 C7orf31Q8N865 590 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 BANK1Q8NDB2 785 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 HAS1Q92839 578 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 CHAMP1Q96JM3 812 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 FAM20AQ96MK3 541 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 MBOAT7Q96N66 472 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 RIT2Q99578 217 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 TSEN34Q9BSV6 310 aaKnown RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 TUT1Q9H6E5 874 aaKnown RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 ZNF302Q9NR11 478 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 GABBR1Q9UBS5 961 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 ZNF215Q9UL58 517 aaPredicted RBP9.4□□□□□ -0.9
ERBB2-216ENST00000584014 CEP131Q9UPN4 1083 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 PHF24Q9UPV7 400 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 TRPC6Q9Y210 931 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 PCDHA10Q9Y5I2 948 aa9.4□□□□□ -0.9
ERBB2-216ENST00000584014 POTEMA6NI47 508 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms