RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 LCE1DQ5T752 114 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 HHIPL2Q6UWX4 724 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 TMC6Q7Z403 805 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 CHTF18Q8WVB6 975 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 BOCQ9BWV1 1114 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 BRINP2Q9C0B6 783 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 NSUN3Q9H649 340 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 H2AFY2Q9P0M6 372 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 NUB1Q9Y5A7 615 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 ATP23Q9Y6H3 246 aa7.81□□□□□ -1.16
SMARCE1-219ENST00000583294 ZBTB48P10074 688 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 VIPR1P32241 457 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 YBX1P67809 324 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 IRF9Q00978 393 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 CYP4F22Q6NT55 531 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 OTOP1Q7RTM1 612 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 NLGN4XQ8N0W4 816 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 PHOSPHO1Q8TCT1 267 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 ALG3Q92685 438 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 TSPAN17Q96FV3 270 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 ZNF552Q9H707 407 aaPredicted RBP7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 RIC8BQ9NVN3 520 aa7.8□□□□□ -1.16
SMARCE1-219ENST00000583294 NEMP1O14524 444 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 ABLIM1O14639 778 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 CPEP16870 476 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 ADCYAP1R1P41586 468 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 CDKN1CP49918 316 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 SRSF3P84103 164 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 ZNF200P98182 395 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 SLC9A5Q14940 896 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 SEC23AQ15436 765 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 FIGNQ5HY92 759 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 BTBD8Q5XKL5 378 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 LHFPL2Q6ZUX7 228 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 NOSTRINQ8IVI9 506 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 TRIM48Q8IWZ4 208 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 ANKRD13AQ8IZ07 590 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 SMC1BQ8NDV3 1235 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 PUS7Q96PZ0 661 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 TTC1Q99614 292 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 YIPF4Q9BSR8 244 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 OXSMQ9NWU1 459 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 MCM8Q9UJA3 840 aa7.79□□□□□ -1.16
SMARCE1-219ENST00000583294 FAM90A27PA6NNH2 459 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 H7C1D1 291 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 HIP1RO75146 1068 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 FKBP9O95302 570 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 EYA4O95677 639 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 CDK11BP21127 795 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 TMEM132BQ14DG7 1078 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 SYDE1Q6ZW31 735 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 FKBP9P1Q75LS8 142 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 PRPF38AQ8NAV1 312 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 IFT22Q9H7X7 185 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 DCP1AQ9NPI6 582 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 SPTLC3Q9NUV7 552 aa7.78□□□□□ -1.16
SMARCE1-219ENST00000583294 DVL2O14641 736 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 CLASP2O75122 1294 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 BPIP17213 487 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 PTPN1P18031 435 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 SLC9A1P19634 815 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 PMLP29590 882 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 STAT5AP42229 794 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 KPNA1P52294 538 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 EPHA5P54756 1037 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 NCKAP1LP55160 1127 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 FAM50AQ14320 339 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 STAT4Q14765 748 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 OLFML2BQ68BL8 750 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 TMEM132EQ6IEE7 984 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 CILP2Q8IUL8 1156 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 WDR66Q8TBY9 1149 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 EPB41L4BQ9H329 900 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 SIRT5Q9NXA8 310 aa7.77□□□□□ -1.17
SMARCE1-219ENST00000583294 ACOT7O00154 380 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 BUB1BO60566 1050 aaPredicted RBP7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 RAP1GAPP47736 663 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 KIF11P52732 1056 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 TMPRSS15P98073 1019 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 ZNF174Q15697 407 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 PAN2Q504Q3 1202 aaKnown RBP7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 CREB3L3Q68CJ9 461 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 SPOCD1Q6ZMY3 1216 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 RPUSD2Q8IZ73 545 aaKnown RBP7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 KIAA1958Q8N8K9 716 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 BHLHE22Q8NFJ8 381 aaPredicted RBP7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 PCIF1Q9H4Z3 704 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 B3GALT1Q9Y5Z6 326 aa7.76□□□□□ -1.17
SMARCE1-219ENST00000583294 MYOCOSA0A1B0GUC4 107 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 PRAMEF25A6NGN4 478 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 C4BPAP04003 597 aaKnown RBP7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 ASGR2P07307 311 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 LSSP48449 732 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 ATP13A4Q4VNC1 1196 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 AMIGO3Q86WK7 504 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 FAM126BQ8IXS8 530 aa7.75□□□□□ -1.17
SMARCE1-219ENST00000583294 FAM26EQ8N5C1 309 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms