RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ABCB11O95342 1321 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 C17orf102A2RUQ5 167 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 FOXP2O15409 715 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 LINC01565O15544 149 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 HRO43593 1189 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 CAND2O75155 1236 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 EYA4O95677 639 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 NR3C2P08235 984 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 FGRP09769 529 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 HOXD8P13378 290 aaPredicted RBP8.9□□□□□ -0.98
CCDC47-205ENST00000582331 GTF2F1P35269 517 aaKnown RBP eCLIP8.9□□□□□ -0.98
CCDC47-205ENST00000582331 NDUFV1P49821 464 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 MYSM1Q5VVJ2 828 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 KCNV1Q6PIU1 500 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 PPP2R3CQ969Q6 453 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 ZDHHC16Q969W1 377 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 MSLNLQ96KJ4 702 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 SPATA33Q96N06 139 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 FSD1Q9BTV5 496 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 SLC4A5Q9BY07 1137 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 OSBPL7Q9BZF2 842 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 TECTAO75443 2155 aa8.9□□□□□ -0.98
CCDC47-205ENST00000582331 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 NLRC5Q86WI3 1866 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 LOC730098B7Z3J9 87 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 TREHO43280 583 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 SORBS3O60504 671 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 CSPG5O95196 566 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 MMP1P03956 469 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 CTSHP09668 335 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 GOLGA8HP0CJ92 632 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 SNHG28P0DPA3 235 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 EIF2AK2P19525 551 aaKnown RBP8.89□□□□□ -0.99
CCDC47-205ENST00000582331 AVPR2P30518 371 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 VCPP55072 806 aaKnown RBP8.89□□□□□ -0.99
CCDC47-205ENST00000582331 SIGLEC14Q08ET2 396 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 HSDL1Q3SXM5 330 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 CELF3Q5SZQ8 465 aaKnown RBP8.89□□□□□ -0.99
CCDC47-205ENST00000582331 GPATCH4Q5T3I0 446 aaKnown RBP8.89□□□□□ -0.99
CCDC47-205ENST00000582331 C16orf70Q9BSU1 422 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 UBA5Q9GZZ9 404 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 ALG13Q9NP73 1137 aaKnown RBP8.89□□□□□ -0.99
CCDC47-205ENST00000582331 PXMP2Q9NR77 195 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 MRPL11Q9Y3B7 192 aaKnown RBP8.89□□□□□ -0.99
CCDC47-205ENST00000582331 KIAA1217Q5T5P2 1943 aa8.89□□□□□ -0.99
CCDC47-205ENST00000582331 ADGRA3Q8IWK6 1321 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 H3BRB1 525 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 GGPS1O95749 300 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 LINC00271P0C7V0 271 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 SMIM10L2AP0DMW4 78 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 SMIM10L2BP0DMW5 78 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 HSPD1P10809 573 aaKnown RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 GNAT1P11488 350 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 MYCLP12524 364 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 RRP1P56182 461 aaKnown RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 BTG3Q14201 252 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 CBX2Q14781 532 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 ALX1Q15699 326 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 CDC37Q16543 378 aaPredicted RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 FAM26DQ5JW98 314 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 VPS53Q5VIR6 699 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 CLP1Q92989 425 aaKnown RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 PLVAPQ9BX97 442 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 CPVLQ9H3G5 476 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 RNPEPQ9H4A4 650 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 TUT1Q9H6E5 874 aaKnown RBP8.88□□□□□ -0.99
CCDC47-205ENST00000582331 MLXIPQ9HAP2 919 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 CLEC1BQ9P126 229 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 PLAGL2Q9UPG8 496 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 MYH7BA7E2Y1 1941 aa8.88□□□□□ -0.99
CCDC47-205ENST00000582331 TTC41PQ6P2S7 1318 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 PROB1E7EW31 1015 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 H0Y858 1186 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 CFBP00751 764 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 FGAP02671 866 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 TGFB3P10600 412 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 HOXC8P31273 242 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 COASYQ13057 564 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 CAMK1Q14012 370 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 ADGRF4Q8IZF3 695 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 EFHBQ8N7U6 833 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 SMRP1Q8NCR6 262 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 P2RX5Q93086 422 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 ASIC4Q96FT7 647 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 RPGRIP1Q96KN7 1286 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 PHF7Q9BWX1 381 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-205ENST00000582331 DCTPP1Q9H773 170 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 TLR9Q9NR96 1032 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 USP15Q9Y4E8 981 aaPredicted RBP8.87□□□□□ -0.99
CCDC47-205ENST00000582331 KMT2EQ8IZD2 1858 aa8.87□□□□□ -0.99
CCDC47-205ENST00000582331 ENPP3O14638 875 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 DHX16O60231 1041 aaKnown RBP8.86□□□□□ -0.99
CCDC47-205ENST00000582331 RGS20O76081 388 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 LGALS2P05162 132 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 NEFLP07196 543 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 DNAJB1P25685 340 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 ICAM3P32942 547 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 NRIP1P48552 1158 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 SP2Q02086 613 aa8.86□□□□□ -0.99
CCDC47-205ENST00000582331 NAALADL2Q58DX5 795 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms