RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 KIAA0319Q5VV43 1072 aa16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 ZFP91Q96JP5 570 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 SPATA33Q96N06 139 aa16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 C16orf70Q9BSU1 422 aa16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 RNPEPQ9H4A4 650 aa16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 SH2B1Q9NRF2 756 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 PLIN4Q96Q06 1357 aa16.58■□□□□ 0.24
CSNK1D-213ENST00000580446 STK25O00506 426 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 EIF2AK2P19525 551 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 LAMC2Q13753 1193 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 LPIN1Q14693 890 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 CMTR2Q8IYT2 770 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 RHPN1Q8TCX5 695 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 SEMA4AQ9H3S1 761 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 FBXL21Q9UKT6 434 aa16.57■□□□□ 0.24
CSNK1D-213ENST00000580446 HIDE1A8MVS5 230 aa16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 APPP05067 770 aa16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 ADRB1P08588 477 aa16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 KCNA4P22459 653 aa16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 KCNC3Q14003 757 aa16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 RUFY4Q6ZNE9 571 aa16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 C12orf76Q8N812 135 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 TDRD5Q8NAT2 981 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 EMID1Q96A84 441 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 KIAA1671Q9BY89 1806 aa16.56■□□□□ 0.24
CSNK1D-213ENST00000580446 NAALADL2Q58DX5 795 aa16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 SPOUT1Q5T280 376 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 TRIM50Q86XT4 487 aa16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 SYTL5Q8TDW5 730 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 GPKOWQ92917 476 aaPredicted RBP eCLIP16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 CPVLQ9H3G5 476 aa16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 CDV3Q9UKY7 258 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-213ENST00000580446 B4DLN1 442 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 GGPS1O95749 300 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 SP9P0CG40 484 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 HOXD8P13378 290 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 HOXC8P31273 242 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 MRPL12P52815 198 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 STXBP2Q15833 593 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 RTN4RL1Q86UN2 441 aaPredicted RBP16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 TRMT2AQ8IZ69 625 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 SUMF1Q8NBK3 374 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 RTP3Q9BQQ7 232 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 TMEM260Q9NX78 707 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 NCDNQ9UBB6 729 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 PLXNA4Q9HCM2 1894 aa16.54■□□□□ 0.24
CSNK1D-213ENST00000580446 H3BRB1 525 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 M0R2C6 588 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 FGF18O76093 207 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 DCNP07585 359 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 SRGAP2BP0DMP2 458 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 CD52P31358 61 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 ARHGAP4P98171 946 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 SP2Q02086 613 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 FAM26DQ5JW98 314 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 RARS2Q5T160 578 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 MYSM1Q5VVJ2 828 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 DCAF4Q8WV16 495 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 RMDN3Q96TC7 470 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 CDCA3Q99618 268 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 TUT1Q9H6E5 874 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 AGO3Q9H9G7 860 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 ZNF287Q9HBT7 754 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 TELO2Q9Y4R8 837 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 CEP295Q9C0D2 2601 aa16.53■□□□□ 0.24
CSNK1D-213ENST00000580446 POTEMA6NI47 508 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 FSCN2O14926 492 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 CAND2O75155 1236 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 PPFIA4O75335 1185 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 LGALS2P05162 132 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 POTEGQ6S5H5 508 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 BTNL9Q6UXG8 535 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 TMEM184AQ6ZMB5 413 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 NSUN6Q8TEA1 469 aaKnown RBP16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 ZBTB10Q96DT7 871 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 EHMT1Q9H9B1 1298 aa16.52■□□□□ 0.24
CSNK1D-213ENST00000580446 MYO10Q9HD67 2058 aa16.52■□□□□ 0.23
CSNK1D-213ENST00000580446 TSPY2A6NKD2 308 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 GPAA1O43292 621 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 CFHP08603 1231 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 UBA1P22314 1058 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 PPM1JQ5JR12 505 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 ARHGEF16Q5VV41 709 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 CES5AQ6NT32 575 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 GIMAP6Q6P9H5 292 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 LMBR1Q8WVP7 490 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 TCF25Q9BQ70 676 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 ADAM7Q9H2U9 754 aa16.51■□□□□ 0.23
CSNK1D-213ENST00000580446 ENTPD7Q9NQZ7 604 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms