RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 CAPN7Q9Y6W3 813 aa16.19■□□□□ 0.18
CUEDC1-206ENST00000577830 PDHBP11177 359 aa16.19■□□□□ 0.18
CUEDC1-206ENST00000577830 GUF1Q8N442 669 aaKnown RBP16.19■□□□□ 0.18
CUEDC1-206ENST00000577830 E7EVH7 732 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 LZTS2Q9BRK4 669 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 DDX47Q9H0S4 455 aaKnown RBP16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 AFF2P51816 1311 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 CORO7P57737 925 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 RPS6KA1Q15418 735 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 SHROOM1Q2M3G4 852 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 CCDC65Q8IXS2 484 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 ADGRF4Q8IZF3 695 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 OTUD6BQ8N6M0 293 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 NEDD1Q8NHV4 660 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 BAP1Q92560 729 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 SPZ1Q9BXG8 430 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 TRIM37O94972 964 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 PLA2G4BP0C869 781 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 MAEAQ7L5Y9 396 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 TEX2Q8IWB9 1127 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 MMGT1Q8N4V1 131 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 GJD4Q96KN9 370 aaPredicted RBP16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 EMILIN3Q9NT22 766 aa16.18■□□□□ 0.18
CUEDC1-206ENST00000577830 TLR2O60603 784 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 HSPA1LP34931 641 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 COPB2P35606 906 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 TADA2BQ86TJ2 420 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 RNPC3Q96LT9 517 aaKnown RBP16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 TLDC2A0PJX2 215 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 GOLGA8KD6RF30 607 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 RAD51CO43502 376 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 KCNH2Q12809 1159 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 PAK2Q13177 524 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 ZNF76P36508 570 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 LRRC55Q6ZSA7 311 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 DAGLBQ8NCG7 672 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 CASKIN2Q8WXE0 1202 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
CUEDC1-206ENST00000577830 TMEM110-MUSTN1A8MSY1 372 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 CETN3O15182 167 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 UBXN2AP68543 259 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 KSR1Q8IVT5 923 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 STK17AQ9UEE5 414 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 PLAAQ9Y263 795 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 ZC3H4Q9UPT8 1303 aaKnown RBP16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 SERPING1P05155 500 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 LRRC63Q05C16 580 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 CUL5Q93034 780 aa16.16■□□□□ 0.18
CUEDC1-206ENST00000577830 A0A1W2PQJ5 194 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 EIF3HO15372 352 aaKnown RBP eCLIP16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 IFT88Q13099 833 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 PCDHA1Q9Y5I3 950 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 HOXA13P31271 388 aaPredicted RBP16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 USP8P40818 1118 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 PPP1R2P41236 205 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 CASP5P51878 434 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 PSMC6P62333 389 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 PTK2Q05397 1052 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 PKD2L1Q9P0L9 805 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 CHORDC1Q9UHD1 332 aaPredicted RBP16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 PVALEFA0A1B0GWK0 134 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 GCNT3O95395 438 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 C16orf86Q6ZW13 317 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 PURBQ96QR8 312 aaKnown RBP16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 JMJD4Q9H9V9 463 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 USP40Q9NVE5 1235 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 HDAC9Q9UKV0 1011 aa16.15■□□□□ 0.18
CUEDC1-206ENST00000577830 GFPT2O94808 682 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 IFFO1Q0D2I5 559 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 GRAPQ13588 217 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 EMBQ6PCB8 327 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 DAAM2Q86T65 1068 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 SPICE1Q8N0Z3 855 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 MTMR9Q96QG7 549 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 CELF4Q9BZC1 486 aaKnown RBP16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 MTMR4Q9NYA4 1195 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 TIAM2Q8IVF5 1701 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 RSPH10B2B2RC85 870 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 MYO1FO00160 1098 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 KRIT1O00522 736 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 CLSTN1O94985 981 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 RSPH10BP0C881 870 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 NR1D1P20393 614 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 TMOD1P28289 359 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 CTNNA1P35221 906 aaKnown RBP16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 ARHGAP44Q17R89 818 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 AMACRQ9UHK6 382 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 TNNC1P63316 161 aa16.14■□□□□ 0.17
CUEDC1-206ENST00000577830 HGSNATQ68CP4 663 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms