RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 PIGSQ96S52 555 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 ASAP1Q9ULH1 1129 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 PTPN22Q9Y2R2 807 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 A0A1W2PQJ5 194 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 FRMD3A2A2Y4 597 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 CASQ2O14958 399 aaPredicted RBP11.24□□□□□ -0.61
PTPRM-205ENST00000577827 MAPK13O15264 365 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 DCTN3O75935 186 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 GFPT1Q06210 699 aaPredicted RBP11.24□□□□□ -0.61
PTPRM-205ENST00000577827 BFSP1Q12934 665 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 AFAP1L2Q8N4X5 818 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 TEKT1Q969V4 418 aa11.24□□□□□ -0.61
PTPRM-205ENST00000577827 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 TXNDC9O14530 226 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 ZBTB22O15209 634 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 CYP27B1O15528 508 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 RHOBTB3O94955 611 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 ANTXR2P58335 489 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 HSP90AA5PQ58FG0 334 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 CTAGE3PQ8IX95 158 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 PPP4R1Q8TF05 950 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 PHF20Q9BVI0 1012 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 PLA2G12BQ9BX93 195 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 AGXT2Q9BYV1 514 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 TMEM206Q9H813 350 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 TTLL1O95922 423 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 TNNI1P19237 187 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 CAV1Q03135 178 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 NOA1Q8NC60 698 aaKnown RBP11.23□□□□□ -0.61
PTPRM-205ENST00000577827 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 TEKT3Q9BXF9 490 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 MRPL11Q9Y3B7 192 aaKnown RBP11.23□□□□□ -0.61
PTPRM-205ENST00000577827 ORC4O43929 436 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 MAPK4P31152 587 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 MRPS25P82663 173 aaKnown RBP11.23□□□□□ -0.61
PTPRM-205ENST00000577827 PTPAQ15257 358 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 FBXL16Q8N461 479 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 CCT8L2Q96SF2 557 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 USP40Q9NVE5 1235 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 ZNF219Q9P2Y4 722 aaPredicted RBP11.23□□□□□ -0.61
PTPRM-205ENST00000577827 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 PDE6BP35913 854 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 PSMC4P43686 418 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 ALCAMQ13740 583 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 PPP2R5AQ15172 486 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
PTPRM-205ENST00000577827 ZNF473Q8WTR7 871 aaKnown RBP11.23□□□□□ -0.61
PTPRM-205ENST00000577827 SAAL1Q96ER3 474 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 WDR11Q9BZH6 1224 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 BATF3Q9NR55 127 aa11.23□□□□□ -0.61
PTPRM-205ENST00000577827 CPS1P31327 1500 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 POLR2BP30876 1174 aaKnown RBP11.22□□□□□ -0.61
PTPRM-205ENST00000577827 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 RFX5P48382 616 aaPredicted RBP11.22□□□□□ -0.61
PTPRM-205ENST00000577827 RWDD2BP57060 319 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 BYSLQ13895 437 aaKnown RBP11.22□□□□□ -0.61
PTPRM-205ENST00000577827 NCAPHQ15003 741 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 GABPB2Q8TAK5 448 aaPredicted RBP11.22□□□□□ -0.61
PTPRM-205ENST00000577827 RAD54LQ92698 747 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 UIMC1Q96RL1 719 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 AK9Q5TCS8 1911 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 CYP2D7A0A087X1C5 515 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 CHRNA3P32297 505 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 SESN3P58005 492 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 CYP4A11Q02928 519 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 C3orf20Q8ND61 904 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 COMMD10Q9Y6G5 202 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 ESYT3A0FGR9 886 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 ARHGAP42A6NI28 874 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 POC1B-GALNT4F8VUJ3 575 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 ATF7P17544 494 aaPredicted RBP11.22□□□□□ -0.61
PTPRM-205ENST00000577827 PMS2P54278 862 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
PTPRM-205ENST00000577827 DHX34Q14147 1143 aaKnown RBP11.22□□□□□ -0.61
PTPRM-205ENST00000577827 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 RAB21Q9UL25 225 aa11.22□□□□□ -0.61
PTPRM-205ENST00000577827 SETSIPP0DME0 302 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 GUCY1A2P33402 732 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 TXNRD1Q16881 649 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 AGBL2Q5U5Z8 902 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 SCYL3Q8IZE3 742 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 GRAMD1AQ96CP6 724 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 HAUS1Q96CS2 278 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 PARVGQ9HBI0 331 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 MRPL47Q9HD33 250 aaKnown RBP11.21□□□□□ -0.61
PTPRM-205ENST00000577827 PNMA2Q9UL42 364 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.61
PTPRM-205ENST00000577827 PNMA6FA0A0J9YX94 578 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 DDX39AO00148 427 aaKnown RBP11.21□□□□□ -0.61
PTPRM-205ENST00000577827 NCK2O43639 380 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 OPHN1O60890 802 aa11.21□□□□□ -0.61
PTPRM-205ENST00000577827 LSP1P33241 339 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms