RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 ADAM17P78536 824 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 SP4Q02446 784 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 MBTPS1Q14703 1052 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 CCDC85BQ15834 202 aaPredicted RBP17.09■□□□□ 0.33
MKS1-205ENST00000577315 PLEKHG4Q58EX7 1191 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 TAF2Q6P1X5 1199 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 DBF4BQ8NFT6 615 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 SEPT8Q92599 483 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 APBB2Q92870 758 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 KCNB2Q92953 911 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 TCEANC2Q96MN5 208 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 MXRA8Q9BRK3 442 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 SETD4Q9NVD3 440 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 ERAP1Q9NZ08 941 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 V9GY48 417 aaPredicted RBP17.09■□□□□ 0.33
MKS1-205ENST00000577315 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
MKS1-205ENST00000577315 NCOR1O75376 2440 aa17.08■□□□□ 0.33
MKS1-205ENST00000577315 LOXHD1Q8IVV2 1947 aa17.08■□□□□ 0.33
MKS1-205ENST00000577315 AMHP03971 560 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 DEFB103AP81534 67 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 ARHGAP4P98171 946 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 FUT2Q10981 343 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 RPAINQ86UA6 219 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 TRIM50Q86XT4 487 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 ARNTL2Q8WYA1 636 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 BARHL2Q9NY43 387 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 LMCD1Q9NZU5 365 aa17.08■□□□□ 0.32
MKS1-205ENST00000577315 NFASCO94856 1347 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 GSTTP1A0A1W2PQM5 241 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 SMCO2A6NFE2 343 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 EPB41L2O43491 1005 aaKnown RBP17.07■□□□□ 0.32
MKS1-205ENST00000577315 REC8O95072 547 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 HSPA4P34932 840 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.32
MKS1-205ENST00000577315 MRPS5P82675 430 aaKnown RBP17.07■□□□□ 0.32
MKS1-205ENST00000577315 FAM26DQ5JW98 314 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 MCTP2Q6DN12 878 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 RSPH3Q86UC2 560 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 FBXL16Q8N461 479 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 LMBR1Q8WVP7 490 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 GLG1Q92896 1179 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 ANO3Q9BYT9 981 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 JPH1Q9HDC5 661 aaPredicted RBP17.07■□□□□ 0.32
MKS1-205ENST00000577315 SLC9A2Q9UBY0 812 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
MKS1-205ENST00000577315 INSL6Q9Y581 213 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 MTCH2Q9Y6C9 303 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 NLRC5Q86WI3 1866 aa17.07■□□□□ 0.32
MKS1-205ENST00000577315 STXBP3O00186 592 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 PSMA5P28066 241 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 PPFIA1Q13136 1202 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 AAK1Q2M2I8 961 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 TCTN1Q2MV58 587 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 CEP55Q53EZ4 464 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 Q6ZUG5 572 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 IL27Q8NEV9 243 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 CCDC12Q8WUD4 166 aaPredicted RBP17.06■□□□□ 0.32
MKS1-205ENST00000577315 JAKMIP1Q96N16 626 aaKnown RBP17.06■□□□□ 0.32
MKS1-205ENST00000577315 ASB2Q96Q27 587 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 TGS1Q96RS0 853 aaKnown RBP17.06■□□□□ 0.32
MKS1-205ENST00000577315 AZI2Q9H6S1 392 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 CERS4Q9HA82 394 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 PRDM6Q9NQX0 595 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 KCNH7Q9NS40 1196 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 FAM217BQ9NTX9 383 aaPredicted RBP17.06■□□□□ 0.32
MKS1-205ENST00000577315 COL4A4P53420 1690 aaPredicted RBP17.06■□□□□ 0.32
MKS1-205ENST00000577315 EVPLQ92817 2033 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 WDR81Q562E7 1941 aa17.06■□□□□ 0.32
MKS1-205ENST00000577315 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 RFXAPO00287 272 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 CTSHP09668 335 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 CDC27P30260 824 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
MKS1-205ENST00000577315 MKRN4PQ13434 485 aaPredicted RBP17.05■□□□□ 0.32
MKS1-205ENST00000577315 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
MKS1-205ENST00000577315 TYW1BQ6NUM6 668 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 NIPA1Q7RTP0 329 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 MICALL1Q8N3F8 863 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 TELO2Q9Y4R8 837 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 SNX14Q9Y5W7 946 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 TCF20Q9UGU0 1960 aaKnown RBP17.05■□□□□ 0.32
MKS1-205ENST00000577315 RALGAPA2Q2PPJ7 1873 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 TTC28Q96AY4 2481 aa17.05■□□□□ 0.32
MKS1-205ENST00000577315 NID2Q14112 1375 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 ESYT2A0FGR8 921 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 ARHGEF15O94989 841 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 ZNF76P36508 570 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 SREBF1P36956 1147 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 ERVK-21P61565 698 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 GRIK4Q16099 956 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
MKS1-205ENST00000577315 PLPPR4Q7Z2D5 763 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 MYOCDQ8IZQ8 938 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 BRF1Q92994 677 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 SAMD11Q96NU1 681 aa17.04■□□□□ 0.32
MKS1-205ENST00000577315 AGXT2Q9BYV1 514 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms