RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 BHMTQ93088 406 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 CRBNQ96SW2 442 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 TINF2Q9BSI4 451 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 FSD1Q9BTV5 496 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 RAVER2Q9HCJ3 691 aaKnown RBP7.4□□□□□ -1.22
NUP88-212ENST00000576708 XPNPEP3Q9NQH7 507 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 PRDM5Q9NQX1 630 aaPredicted RBP7.4□□□□□ -1.22
NUP88-212ENST00000576708 SLC5A4Q9NY91 659 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 FAM13BQ9NYF5 915 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 TACC3Q9Y6A5 838 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 ROBO3Q96MS0 1386 aa7.4□□□□□ -1.22
NUP88-212ENST00000576708 GREB1LQ9C091 1923 aaPredicted RBP7.4□□□□□ -1.23
NUP88-212ENST00000576708 TTC41PQ6P2S7 1318 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 TRIM43BA6NCK2 446 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 SNAI1O95863 264 aaPredicted RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 GNAT2P19087 354 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 TARSP26639 723 aaKnown RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 MZF1P28698 734 aaPredicted RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 PCBP4P57723 403 aaKnown RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 SNAP25P60880 206 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 TFAP4Q01664 338 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 TLE2Q04725 743 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 CCINQ13939 588 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 SHHQ15465 462 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 ZMYM1Q5SVZ6 1142 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 C9orf50Q5SZB4 431 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 ANKRD45Q5TZF3 282 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 VPS53Q5VIR6 699 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 SLFN13Q68D06 897 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 SND1Q7KZF4 910 aaKnown RBP eCLIP7.39□□□□□ -1.23
NUP88-212ENST00000576708 SLC17A8Q8NDX2 589 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 NEDD1Q8NHV4 660 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 BADQ92934 168 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 MKL1Q969V6 931 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 TRIM43Q96BQ3 446 aaPredicted RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 DDX11Q96FC9 970 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 FAM161BQ96MY7 647 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 LBHD1Q9BQE6 289 aaPredicted RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 TEX13BQ9BXU2 312 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 MTMR4Q9NYA4 1195 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 BRPF3Q9ULD4 1205 aa7.39□□□□□ -1.23
NUP88-212ENST00000576708 ISY1Q9ULR0 285 aaKnown RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 DDX49Q9Y6V7 483 aaKnown RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 ZNFX1Q9P2E3 1918 aaKnown RBP7.39□□□□□ -1.23
NUP88-212ENST00000576708 SALL3Q9BXA9 1300 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 DNAJC25-GNG10A0A024R161 153 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 MYADML2A6NDP7 307 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 TMEM232C9JQI7 657 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 ADCY6O43306 1168 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 NMT2O60551 498 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 ZBED4O75132 1171 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 TTLL1O95922 423 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 TSPY3P0CV98 308 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 TSPY8P0CW00 308 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 RARBP10826 455 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 NFKB1P19838 968 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 MX1P20591 662 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 PTGS1P23219 599 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 ITGB8P26012 769 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 RRP1P56182 461 aaKnown RBP7.38□□□□□ -1.23
NUP88-212ENST00000576708 PPARAQ07869 468 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 SNX17Q15036 470 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 SYT9Q86SS6 491 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 PRPF38AQ8NAV1 312 aaKnown RBP7.38□□□□□ -1.23
NUP88-212ENST00000576708 FGD4Q96M96 766 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 PNMA5Q96PV4 448 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 NAPBQ9H115 298 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 IGFLR1Q9H665 355 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 SLC38A10Q9HBR0 1119 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 PDLIM7Q9NR12 457 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 HOMER2Q9NSB8 354 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 MTMR10Q9NXD2 777 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 ZFATQ9P243 1243 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 ZHX1Q9UKY1 873 aaPredicted RBP7.38□□□□□ -1.23
NUP88-212ENST00000576708 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
NUP88-212ENST00000576708 CTDP1Q9Y5B0 961 aaPredicted RBP7.38□□□□□ -1.23
NUP88-212ENST00000576708 DNAH12Q6ZR08 3092 aa7.38□□□□□ -1.23
NUP88-212ENST00000576708 LAMA3Q16787 3333 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 SYNRGQ9UMZ2 1314 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 LTBP2Q14767 1821 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 A0A1W2PQ45 241 aaPredicted RBP7.37□□□□□ -1.23
NUP88-212ENST00000576708 A0A1W2PQY0 241 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 ERC2O15083 957 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 NDUFB5O43674 189 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 PQBP1O60828 265 aaKnown RBP7.37□□□□□ -1.23
NUP88-212ENST00000576708 ADAMTS4O75173 837 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 BMP3P12645 472 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 AKR1A1P14550 325 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 PCSK2P16519 638 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 MCCP23508 829 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 MAPK1P28482 360 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 COPB2P35606 906 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 EPHB4P54760 987 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 CNTN2Q02246 1040 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 SRSF11Q05519 484 aaKnown RBP7.37□□□□□ -1.23
NUP88-212ENST00000576708 PDE4BQ07343 736 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 TBC1D8BQ0IIM8 1120 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 KCTD1Q719H9 257 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 RNF180Q86T96 592 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms