RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 GLG1Q92896 1179 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 LRRC45Q96CN5 670 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 LBHD1Q9BQE6 289 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 KIF9Q9HAQ2 790 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 PLCB1Q9NQ66 1216 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 SEPT11Q9NVA2 429 aaKnown RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 PANK4Q9NVE7 773 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 SAP30BPQ9UHR5 308 aaKnown RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 AKAP11Q9UKA4 1901 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 MYH2Q9UKX2 1941 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 ERVV-2B6SEH9 535 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 F8W031 263 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-209ENST00000576012 DIAPH2O60879 1101 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 TRIM37O94972 964 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 ADAMTS2O95450 1211 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 PRDX5P30044 214 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 ECHS1P30084 290 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 PLTPP55058 493 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 CDK17Q00537 523 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 AMPD3Q01432 767 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 BIRC2Q13490 618 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 SLC35G1Q2M3R5 365 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 RUFY4Q6ZNE9 571 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 ZNF572Q7Z3I7 529 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-209ENST00000576012 ANKS1AQ92625 1134 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 DDX12PQ92771 950 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 RSRC1Q96IZ7 334 aaKnown RBP15.89■□□□□ 0.13
SCARF1-209ENST00000576012 MYH6P13533 1939 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 SMCO2A6NFE2 343 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 KCNJ2P63252 427 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 IFI35P80217 286 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-209ENST00000576012 WLSQ5T9L3 541 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 PEX26Q7Z412 305 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 CCDC25Q86WR0 208 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 CCDC197Q8NCU1 140 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 ZNF384Q8TF68 577 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 PRMT1Q99873 361 aaKnown RBP15.89■□□□□ 0.13
SCARF1-209ENST00000576012 CCSER1Q9C0I3 900 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 ISCUQ9H1K1 167 aa15.89■□□□□ 0.13
SCARF1-209ENST00000576012 PHRF1Q9P1Y6 1649 aaKnown RBP15.89■□□□□ 0.13
SCARF1-209ENST00000576012 H0YGN5 161 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 ANP32DO95626 131 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 PTK2Q05397 1052 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 ASTE1Q2TB18 679 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 CENPPQ6IPU0 288 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 LRRC34Q8IZ02 419 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 SPICE1Q8N0Z3 855 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 ABCF3Q9NUQ8 709 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 CHORDC1Q9UHD1 332 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 NFS1Q9Y697 457 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 FLT1P17948 1338 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 EME2A4GXA9 379 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 SPDYE3A6NKU9 549 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 C21orf2O43822 256 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 SERPING1P05155 500 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 ZKSCAN8Q15776 578 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 ASIC2Q16515 512 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 DCAF17Q5H9S7 520 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 TRIM68Q6AZZ1 485 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 RCSD1Q6JBY9 416 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 SNX29Q8TEQ0 813 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 CHMP6Q96FZ7 201 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 MMTAG2Q9BU76 263 aaKnown RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 NOL4O94818 638 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 KIF4AO95239 1232 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 SLC9A1P19634 815 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 GJB7Q6PEY0 223 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 TATDN2Q93075 761 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 DCP1AQ9NPI6 582 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 LUC7LQ9NQ29 371 aaKnown RBP15.88■□□□□ 0.13
SCARF1-209ENST00000576012 TRIM33Q9UPN9 1127 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 SNX24Q9Y343 169 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 ATP6V0A2Q9Y487 856 aa15.88■□□□□ 0.13
SCARF1-209ENST00000576012 NID2Q14112 1375 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 DRD4P21917 467 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 HNRNPH3P31942 346 aaKnown RBP15.87■□□□□ 0.13
SCARF1-209ENST00000576012 FIGNQ5HY92 759 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 RNF10Q8N5U6 811 aaKnown RBP15.87■□□□□ 0.13
SCARF1-209ENST00000576012 DYDC1Q8WWB3 177 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 CCT6BQ92526 530 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 CUL5Q93034 780 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 XPO6Q96QU8 1125 aaKnown RBP15.87■□□□□ 0.13
SCARF1-209ENST00000576012 TSG101Q99816 390 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 AZI2Q9H6S1 392 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 TSKSQ9UJT2 592 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 BCS1LQ9Y276 419 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 RAD21O60216 631 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 TDP2O95551 362 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 FGGP02679 453 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 TNFRSF8P28908 595 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 RCAN1P53805 252 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 SLC18A3Q16572 532 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 CD302Q8IX05 232 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 LARP4BQ92615 738 aaKnown RBP15.87■□□□□ 0.13
SCARF1-209ENST00000576012 YIPF3Q9GZM5 350 aa15.87■□□□□ 0.13
SCARF1-209ENST00000576012 PRDM16Q9HAZ2 1276 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms