RNA–Protein interactions for RNA: ENST00000575397.5

RFWD3-211, Transcript of ring finger and WD repeat domain 3, human

TSL 2

Gene RFWD3, Length 841 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD3-211	ENST00000575397	MAP3K14	Q99558	947 aa		10.79	□□□□□ -0.68
RFWD3-211	ENST00000575397	FAM13B	Q9NYF5	915 aa		10.79	□□□□□ -0.68
RFWD3-211	ENST00000575397	PYCARD	Q9ULZ3	195 aa		10.79	□□□□□ -0.68
RFWD3-211	ENST00000575397	GREB1L	Q9C091	1923 aa	Predicted RBP	10.79	□□□□□ -0.68
RFWD3-211	ENST00000575397	BDP1	A6H8Y1	2624 aa		10.79	□□□□□ -0.68
RFWD3-211	ENST00000575397	MYO9B	Q13459	2157 aa		10.79	□□□□□ -0.68
RFWD3-211	ENST00000575397	HAX1	O00165	279 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	ATP2A1	O14983	1001 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	DYNC1LI2	O43237	492 aa	Predicted RBP	10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	GTPBP6	O43824	516 aa	Predicted RBP	10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	TLL1	O43897	1013 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	DDAH1	O94760	285 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	RASA1	P20936	1047 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	CDC27	P30260	824 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	NKX3-2	P78367	333 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	PPARA	Q07869	468 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	FSCN1	Q16658	493 aa	Known RBP	10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	EEPD1	Q7L9B9	569 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	SPRED2	Q7Z698	418 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	LRRC8A	Q8IWT6	810 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	RPUSD2	Q8IZ73	545 aa	Known RBP	10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	AOPEP	Q8N6M6	819 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	PPP1R13L	Q8WUF5	828 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	AGBL1	Q96MI9	1066 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	PYM1	Q9BRP8	204 aa	Known RBP	10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	SLC26A6	Q9BXS9	759 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	SLC38A10	Q9HBR0	1119 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	C11orf16	Q9NQ32	467 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	PDGFC	Q9NRA1	345 aa		10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	GNE	Q9Y223	722 aa	Known RBP	10.78	□□□□□ -0.68
RFWD3-211	ENST00000575397	SOWAHB	A6NEL2	793 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	RBAK-RBAKDN	I3L0D1	243 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	RANBP6	O60518	1105 aa	Known RBP	10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	CYP2C9	P11712	490 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	SMPD1	P17405	629 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	AKAP17A	Q02040	695 aa	Known RBP	10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	ALYREF	Q86V81	257 aa	Known RBP	10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	IQCA1	Q86XH1	822 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	ZNF654	Q8IZM8	581 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	LRRC47	Q8N1G4	583 aa	Known RBP	10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	FANCB	Q8NB91	859 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	CCDC112	Q8NEF3	446 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	CHST13	Q8NET6	341 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	ARNTL2	Q8WYA1	636 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	BRMS1	Q9HCU9	246 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	A1CF	Q9NQ94	594 aa	Known RBP	10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	TRMT13	Q9NUP7	481 aa	Known RBP	10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	NYAP2	Q9P242	653 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	FBXO40	Q9UH90	709 aa		10.77	□□□□□ -0.69
RFWD3-211	ENST00000575397	CTIF	O43310	598 aa	Known RBP	10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	ORC4	O43929	436 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	CABYR	O75952	493 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	MYL5	Q02045	173 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	CCDC178	Q5BJE1	867 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	CATIP	Q7Z7H3	387 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	FBXO16	Q8IX29	292 aa	Predicted RBP	10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	DIS3L2	Q8IYB7	885 aa	Known RBP	10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	FAM133A	Q8N9E0	248 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	CACTIN	Q8WUQ7	758 aa	Known RBP	10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	PHKB	Q93100	1093 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	PURB	Q96QR8	312 aa	Known RBP	10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	AP5M1	Q9H0R1	490 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	MKNK2	Q9HBH9	465 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	CD320	Q9NPF0	282 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	ARPP21	Q9UBL0	812 aa	Predicted RBP	10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	KCNH3	Q9ULD8	1083 aa		10.76	□□□□□ -0.69
RFWD3-211	ENST00000575397	SCN5A	Q14524	2016 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	TRANK1	O15050	2925 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	MINDY4B	A8MYZ0	360 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	PRPF3	O43395	683 aa	Known RBP	10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	ZEB2	O60315	1214 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	PRDM1	O75626	825 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	POU3F3	P20264	500 aa	Predicted RBP	10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	TRAPPC10	P48553	1259 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	SNAP25	P60880	206 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	TAP1	Q03518	808 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	CTDSPL2	Q05D32	466 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	SEC23A	Q15436	765 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	DPCR1	Q3MIW9	517 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	NT5DC1	Q5TFE4	455 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	TAPT1	Q6NXT6	567 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	SHC4	Q6S5L8	630 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	KRBA2	Q6ZNG9	492 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	MLKL	Q8NB16	471 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	CNNM3	Q8NE01	707 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	HLA-C	Q95604	372 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	ACAD9	Q9H845	621 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	RNF146	Q9NTX7	359 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	FEM1B	Q9UK73	627 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	COG5	Q9UP83	839 aa		10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	COL4A4	P53420	1690 aa	Predicted RBP	10.75	□□□□□ -0.69
RFWD3-211	ENST00000575397	MYH4	Q9Y623	1939 aa		10.74	□□□□□ -0.69
RFWD3-211	ENST00000575397	IGKV6D-41	A0A0C4DH26	115 aa		10.74	□□□□□ -0.69
RFWD3-211	ENST00000575397	TMEM232	C9JQI7	657 aa		10.74	□□□□□ -0.69
RFWD3-211	ENST00000575397	GPR37L1	O60883	481 aa		10.74	□□□□□ -0.69
RFWD3-211	ENST00000575397	SKIL	P12757	684 aa		10.74	□□□□□ -0.69
RFWD3-211	ENST00000575397	ALAS1	P13196	640 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms