RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 DEFB129Q9H1M3 183 aa15.56■□□□□ 0.08
VPS33B-208ENST00000574755 A0A1W2PQJ5 194 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 SETQ01105 290 aaPredicted RBP15.55■□□□□ 0.08
VPS33B-208ENST00000574755 PPP2R5CQ13362 524 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 DGKZQ13574 1117 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 CTTNQ14247 550 aaKnown RBP15.55■□□□□ 0.08
VPS33B-208ENST00000574755 MEA1Q16626 185 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 CCDC125Q86Z20 511 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 TPH2Q8IWU9 490 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 CPXCR1Q8N123 301 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 SLC5A5Q92911 643 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 IQCDQ96DY2 449 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 ZNF577Q9BSK1 485 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 EYA4O95677 639 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 HSD17B4P51659 736 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 SFR1Q86XK3 245 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 CEP63Q96MT8 703 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 HSD17B14Q9BPX1 270 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 KCTD10Q9H3F6 313 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 MMRN2Q9H8L6 949 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 TUFT1Q9NNX1 390 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 FAM207AQ9NSI2 230 aaPredicted RBP15.55■□□□□ 0.08
VPS33B-208ENST00000574755 SIK3Q9Y2K2 1263 aa15.55■□□□□ 0.08
VPS33B-208ENST00000574755 RBBP6Q7Z6E9 1792 aaKnown RBP15.54■□□□□ 0.08
VPS33B-208ENST00000574755 NFIBO00712 420 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 CASP5P51878 434 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 MAP3K9P80192 1104 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 ZNF569Q5MCW4 686 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 KCTD17Q8N5Z5 321 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 PIGOQ8TEQ8 1089 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 DYDC2Q96IM9 177 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 CGNQ9P2M7 1197 aaKnown RBP15.54■□□□□ 0.08
VPS33B-208ENST00000574755 LTBP3Q9NS15 1303 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 TBCAO75347 108 aaKnown RBP15.54■□□□□ 0.08
VPS33B-208ENST00000574755 FLOT1O75955 427 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 SLITRK3O94933 977 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 ARP10275 920 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 ALAS1P13196 640 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 PRELPP51888 382 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 MTMR2Q13614 643 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 R3HDM1Q15032 1099 aaKnown RBP15.54■□□□□ 0.08
VPS33B-208ENST00000574755 ERCC6LQ2NKX8 1250 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 NBPF12Q5TAG4 269 aaPredicted RBP15.54■□□□□ 0.08
VPS33B-208ENST00000574755 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 RUSC1Q9BVN2 902 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 CARD6Q9BX69 1037 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 WDR11Q9BZH6 1224 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 GINM1Q9NU53 330 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 CD2APQ9Y5K6 639 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 MRFAP1Q9Y605 127 aa15.54■□□□□ 0.08
VPS33B-208ENST00000574755 SRCAPQ6ZRS2 3230 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 RSPH10B2B2RC85 870 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 FZD9O00144 591 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 GNA14O95837 355 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 ABL1P00519 1130 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 RSPH10BP0C881 870 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 PPP4R3CPQ6ZMV5 832 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 MCF2L2Q86YR7 1114 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 HOMER2Q9NSB8 354 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 REXO2Q9Y3B8 237 aaKnown RBP15.53■□□□□ 0.08
VPS33B-208ENST00000574755 IPO5O00410 1097 aaKnown RBP15.53■□□□□ 0.08
VPS33B-208ENST00000574755 VCAM1P19320 739 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 CYLC1P35663 651 aaPredicted RBP15.53■□□□□ 0.08
VPS33B-208ENST00000574755 ADAM9Q13443 819 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 KRT26Q7Z3Y9 468 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 MXRA8Q9BRK3 442 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 NHEJ1Q9H9Q4 299 aaPredicted RBP15.53■□□□□ 0.08
VPS33B-208ENST00000574755 SLC38A10Q9HBR0 1119 aa15.53■□□□□ 0.08
VPS33B-208ENST00000574755 RAVER2Q9HCJ3 691 aaKnown RBP15.53■□□□□ 0.08
VPS33B-208ENST00000574755 EPHB6O15197 1021 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 IPO7O95373 1038 aaKnown RBP15.52■□□□□ 0.08
VPS33B-208ENST00000574755 ARHGAP25P42331 645 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 EDRF1Q3B7T1 1238 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 RINT1Q6NUQ1 792 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 CCDC155Q8N6L0 562 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 CLEC4DQ8WXI8 215 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 TEKT3Q9BXF9 490 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 UNC45AQ9H3U1 944 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 POLD4Q9HCU8 107 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 COL20A1Q9P218 1284 aa15.52■□□□□ 0.08
VPS33B-208ENST00000574755 CTDP1Q9Y5B0 961 aaPredicted RBP15.52■□□□□ 0.08
VPS33B-208ENST00000574755 DOCK1Q14185 1865 aa15.52■□□□□ 0.07
VPS33B-208ENST00000574755 MYBP10242 640 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 NR2F2P24468 414 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 KRT83P78385 493 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 KNOP1Q1ED39 458 aaKnown RBP15.51■□□□□ 0.07
VPS33B-208ENST00000574755 DCAF15Q66K64 600 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 CCDC170Q8IYT3 715 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 UBXN4Q92575 508 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 MYO1AQ9UBC5 1043 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.51■□□□□ 0.07
VPS33B-208ENST00000574755 CETN3O15182 167 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 GCNT3O95395 438 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 ITGB5P18084 799 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 MARSP56192 900 aaKnown RBP15.51■□□□□ 0.07
VPS33B-208ENST00000574755 EPM2AIP1Q7L775 607 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-208ENST00000574755 SLC35F6Q8N357 371 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 NEK11Q8NG66 645 aa15.51■□□□□ 0.07
VPS33B-208ENST00000574755 SMCR8Q8TEV9 937 aaPredicted RBP15.51■□□□□ 0.07
VPS33B-208ENST00000574755 RPAP3Q9H6T3 665 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms