RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ZEB2O60315 1214 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 ERLIN2O94905 339 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 AKR1B1P15121 316 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 MRPL12P52815 198 aaKnown RBP17.18■□□□□ 0.34
NUP88-207ENST00000573584 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 MREGQ8N565 214 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 FAM163AQ96GL9 167 aaPredicted RBP17.18■□□□□ 0.34
NUP88-207ENST00000573584 KDM3AQ9Y4C1 1321 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 CLK2P49760 499 aaKnown RBP17.18■□□□□ 0.34
NUP88-207ENST00000573584 FAM98CQ17RN3 349 aaKnown RBP17.18■□□□□ 0.34
NUP88-207ENST00000573584 PPP1R18Q6NYC8 613 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 GPBP1Q86WP2 473 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 PIK3R5Q8WYR1 880 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 TAF4BQ92750 862 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 KCTD10Q9H3F6 313 aa17.18■□□□□ 0.34
NUP88-207ENST00000573584 KCNH2Q12809 1159 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 PICALMQ13492 652 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 HYIQ5T013 277 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 ICE2Q659A1 982 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
NUP88-207ENST00000573584 KLHL7Q8IXQ5 586 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 USP38Q8NB14 1042 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 WHAMMQ8TF30 809 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 RNPC3Q96LT9 517 aaKnown RBP17.17■□□□□ 0.34
NUP88-207ENST00000573584 ZHX3Q9H4I2 956 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 RAD51CO43502 376 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 IL1R1P14778 569 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 TNNC1P63316 161 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 RPS6KA1Q15418 735 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 KDM7AQ6ZMT4 941 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 GANQ9H2C0 597 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 POLD4Q9HCU8 107 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 POTEB3A0JP26 581 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 POTECB2RU33 542 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 KCNK3O14649 394 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 CETN3O15182 167 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 CLSTN1O94985 981 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
NUP88-207ENST00000573584 GCFC2P16383 781 aaKnown RBP17.17■□□□□ 0.34
NUP88-207ENST00000573584 POTEBQ6S5H4 581 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 CD302Q8IX05 232 aa17.17■□□□□ 0.34
NUP88-207ENST00000573584 SLC16A2P36021 539 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 GUCY1A3Q02108 690 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 PTK2Q05397 1052 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 TTLL1O95922 423 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 ACTN1P12814 892 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 CYP11B2P19099 503 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 B4GALNT4Q76KP1 1039 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 COL24A1Q17RW2 1714 aa17.16■□□□□ 0.34
NUP88-207ENST00000573584 PLIN4Q96Q06 1357 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 NR1D1P20393 614 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 NR2F2P24468 414 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 INPP5BP32019 993 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 LSP1P33241 339 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 RFC4P35249 363 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 TMEM59LQ9UK28 342 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 GAKO14976 1311 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 SBF2Q86WG5 1849 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 GABPAQ06546 454 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 EDRF1Q3B7T1 1238 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 MAATS1Q7Z4T9 603 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 RPGRQ92834 1020 aaKnown RBP17.15■□□□□ 0.34
NUP88-207ENST00000573584 SPAG5Q96R06 1193 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 CCNL1Q9UK58 526 aaPredicted RBP17.15■□□□□ 0.34
NUP88-207ENST00000573584 ZNF831Q5JPB2 1677 aa17.15■□□□□ 0.34
NUP88-207ENST00000573584 IGKV6D-41A0A0C4DH26 115 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 USP17L10C9JJH3 530 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 SLC9A1P19634 815 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 HLTFQ14527 1009 aaKnown RBP eCLIP17.14■□□□□ 0.33
NUP88-207ENST00000573584 C10orf76Q5T2E6 689 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 ZNF571Q7Z3V5 609 aaPredicted RBP17.14■□□□□ 0.33
NUP88-207ENST00000573584 IRF2BP2Q7Z5L9 587 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 ATP6V1G3Q96LB4 118 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 TAF1DQ9H5J8 278 aaPredicted RBP17.14■□□□□ 0.33
NUP88-207ENST00000573584 HDAC9Q9UKV0 1011 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 TNRC6CQ9HCJ0 1690 aaKnown RBP17.14■□□□□ 0.33
NUP88-207ENST00000573584 BTNL10A8MVZ5 291 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 ZBTB5O15062 677 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 EMC10Q5UCC4 262 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 ZC3H3Q8IXZ2 948 aaKnown RBP17.14■□□□□ 0.33
NUP88-207ENST00000573584 EPN3Q9H201 632 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 GOLPH3Q9H4A6 298 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 PLAAQ9Y263 795 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 DAGLAQ9Y4D2 1042 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 CES2O00748 559 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 CEP104O60308 925 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 KIF4AO95239 1232 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 MYBP10242 640 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 CEP85LQ5SZL2 805 aa17.14■□□□□ 0.33
NUP88-207ENST00000573584 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms