RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 RIC8AQ9NPQ8 531 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 SETD4Q9NVD3 440 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 EVPLQ92817 2033 aa11.04□□□□□ -0.64
NPLOC4-212ENST00000573328 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 STXBP3O00186 592 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 EFCAB14O75071 495 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 ATP9AO75110 1047 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 LGR5O75473 907 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 FOSP01100 380 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 CXCL10P02778 98 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 ADD1P35611 737 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 ZNF76P36508 570 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 DEFB103AP81534 67 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 IKBKEQ14164 716 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 SEPT1Q8WYJ6 367 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 SDF4Q9BRK5 362 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 JPH1Q9HDC5 661 aaPredicted RBP11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 JADE2Q9NQC1 790 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 TMEM260Q9NX78 707 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 BARHL2Q9NY43 387 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 TELO2Q9Y4R8 837 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 UBIAD1Q9Y5Z9 338 aa11.03□□□□□ -0.64
NPLOC4-212ENST00000573328 RALGAPA2Q2PPJ7 1873 aa11.02□□□□□ -0.64
NPLOC4-212ENST00000573328 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 MAFGO15525 162 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 GTPBP6O43824 516 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 SCG2P13521 617 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 RPS6KB1P23443 525 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 FUT2Q10981 343 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 PPFIA1Q13136 1202 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 AP3B2Q13367 1082 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 ADGRE1Q14246 886 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 GPNMBQ14956 572 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 JAKMIP3Q5VZ66 844 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 MYOCDQ8IZQ8 938 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 CCDC12Q8WUD4 166 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 LMBR1Q8WVP7 490 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 ARNTL2Q8WYA1 636 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 COL25A1Q9BXS0 654 aaPredicted RBP11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 AZI2Q9H6S1 392 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 SLC9A2Q9UBY0 812 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 NRCAMQ92823 1304 aa11.02□□□□□ -0.65
NPLOC4-212ENST00000573328 PRRC2BQ5JSZ5 2229 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TCF20Q9UGU0 1960 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 GSTTP1A0A1W2PQM5 241 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 RFXAPO00287 272 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 PPFIA3O75145 1194 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 CAND2O75155 1236 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 AMHP03971 560 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 HOXC8P31273 242 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 IGBP1P78318 339 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 SKIV2LQ15477 1246 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 GRIK4Q16099 956 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 PFKFB3Q16875 520 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TCTN1Q2MV58 587 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 CEP55Q53EZ4 464 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TRAF7Q6Q0C0 670 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 RSPH3Q86UC2 560 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TEX2Q8IWB9 1127 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 KCNB2Q92953 911 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 PHKBQ93100 1093 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TSPYL2Q9H2G4 693 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 C6orf50Q9HD87 102 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 KCNH7Q9NS40 1196 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 THEGQ9P2T0 379 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TCEAL9Q9UHQ7 104 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TUBE1Q9UJT0 475 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
NPLOC4-212ENST00000573328 LCHNA4D1U4 455 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 RBAK-RBAKDNI3L0D1 243 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 GJB5O95377 273 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 ARP10275 920 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 SREBF1P36956 1147 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
NPLOC4-212ENST00000573328 TAP1Q03518 808 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 TAF2Q6P1X5 1199 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 REXO1Q8N1G1 1221 aaKnown RBP11□□□□□ -0.65
NPLOC4-212ENST00000573328 IL27Q8NEV9 243 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 CCDC148Q8NFR7 591 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 CYP2W1Q8TAV3 490 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 SEPT8Q92599 483 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 SLC26A6Q9BXS9 759 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 PRDM6Q9NQX0 595 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 MTUS1Q9ULD2 1270 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 NID2Q14112 1375 aa11□□□□□ -0.65
NPLOC4-212ENST00000573328 BACH1O14867 736 aa10.99□□□□□ -0.65
NPLOC4-212ENST00000573328 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms