RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 CERS4Q9HA82 394 aa23.78■■□□□ 1.4
CHRNB1-204ENST00000572857 TRIP12Q14669 1992 aaPredicted RBP23.78■■□□□ 1.4
CHRNB1-204ENST00000572857 GSTTP1A0A1W2PQM5 241 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 CTSHP09668 335 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 MARK3P27448 753 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 IKBKEQ14164 716 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 GLG1Q92896 1179 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 KCNH7Q9NS40 1196 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 CHD9Q3L8U1 2897 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 TET1Q8NFU7 2136 aa23.77■■□□□ 1.4
CHRNB1-204ENST00000572857 ABHD14A-ACY1A0A1B0GW23 586 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 TLL1O43897 1013 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 PPFIA3O75145 1194 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 LGR5O75473 907 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 SCG2P13521 617 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 DEFB103AP81534 67 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 CCDC85BQ15834 202 aaPredicted RBP23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 PFKFB3Q16875 520 aaPredicted RBP23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 JAKMIP3Q5VZ66 844 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 LMBR1Q8WVP7 490 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 GLT8D2Q9H1C3 349 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 EMSYQ7Z589 1322 aa23.76■■□□□ 1.39
CHRNB1-204ENST00000572857 MYO9BQ13459 2157 aa23.75■■□□□ 1.39
CHRNB1-204ENST00000572857 TANC1Q9C0D5 1861 aa23.75■■□□□ 1.39
CHRNB1-204ENST00000572857 ARP10275 920 aa23.75■■□□□ 1.39
CHRNB1-204ENST00000572857 ZNF76P36508 570 aa23.75■■□□□ 1.39
CHRNB1-204ENST00000572857 TEX2Q8IWB9 1127 aa23.75■■□□□ 1.39
CHRNB1-204ENST00000572857 DBF4BQ8NFT6 615 aa23.75■■□□□ 1.39
CHRNB1-204ENST00000572857 JPH1Q9HDC5 661 aaPredicted RBP23.75■■□□□ 1.39
CHRNB1-204ENST00000572857 RFXAPO00287 272 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 ARHGEF15O94989 841 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 AKAP17AQ02040 695 aaKnown RBP23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 AP3B2Q13367 1082 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 CEP55Q53EZ4 464 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 FAM117BQ6P1L5 589 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 PHKBQ93100 1093 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 SDF4Q9BRK5 362 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 SMARCAD1Q9H4L7 1026 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 ERAP1Q9NZ08 941 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 SLC9A2Q9UBY0 812 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 NRCAMQ92823 1304 aa23.74■■□□□ 1.39
CHRNB1-204ENST00000572857 EFCAB14O75071 495 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 SREBF1P36956 1147 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 CLK2P49760 499 aaKnown RBP23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 CCT2P78371 535 aaKnown RBP23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 ADAM17P78536 824 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 TAP1Q03518 808 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 PPFIA1Q13136 1202 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 MICALL1Q8N3F8 863 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 FBXL16Q8N461 479 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 ARNTL2Q8WYA1 636 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 COL25A1Q9BXS0 654 aaPredicted RBP23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 AGXT2Q9BYV1 514 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 PRDM6Q9NQX0 595 aa23.73■■□□□ 1.39
CHRNB1-204ENST00000572857 EYSQ5T1H1 3165 aa23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 PRPF3O43395 683 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 PKN1Q16512 942 aa23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 RUFY3Q7L099 469 aa23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 OSBPL7Q9BZF2 842 aa23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 AZI2Q9H6S1 392 aa23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 NCOA5Q9HCD5 579 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 AGO4Q9HCK5 861 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 C6orf50Q9HD87 102 aa23.72■■□□□ 1.39
CHRNB1-204ENST00000572857 UNC80Q8N2C7 3258 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 CUL9Q8IWT3 2517 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 DOCK5Q9H7D0 1870 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 LCHNA4D1U4 455 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 MEIS1O00470 390 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 ADAMTS3O15072 1205 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 CAND2O75155 1236 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 PDIA3P30101 505 aaKnown RBP23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 IGBP1P78318 339 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 GRIK4Q16099 956 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 PLEKHG4Q58EX7 1191 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 RUFY4Q6ZNE9 571 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 CCDC12Q8WUD4 166 aaPredicted RBP23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 SEPT8Q92599 483 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 PCYT2Q99447 389 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 SLC26A6Q9BXS9 759 aa23.71■■□□□ 1.39
CHRNB1-204ENST00000572857 EPOPA6NHQ4 379 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 GJB5O95377 273 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 ACTR2P61160 394 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 ITGB3BPQ13352 177 aaPredicted RBP23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 UIMC1Q96RL1 719 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 RAD9AQ99638 391 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 LARP6Q9BRS8 491 aaKnown RBP23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 ZMYND12Q9H0C1 365 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 ZSWIM6Q9HCJ5 1215 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 CYP46A1Q9Y6A2 500 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 GBF1Q92538 1859 aa23.7■■□□□ 1.38
CHRNB1-204ENST00000572857 PRUNE2Q8WUY3 3088 aa23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 NFASCO94856 1347 aa23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 ESYT2A0FGR8 921 aa23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 DDX39AO00148 427 aaKnown RBP23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 EPB41L2O43491 1005 aaKnown RBP23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 AMHP03971 560 aa23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 NTRK3Q16288 839 aa23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 SPRED2Q7Z698 418 aa23.69■■□□□ 1.38
CHRNB1-204ENST00000572857 PLA2G4DQ86XP0 818 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms