RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 ZNF277Q9NRM2 450 aaPredicted RBP18.02■□□□□ 0.47
POLR2A-201ENST00000572844 PGAP2Q9UHJ9 254 aa18.02■□□□□ 0.47
POLR2A-201ENST00000572844 MYO6Q9UM54 1294 aa18.02■□□□□ 0.47
POLR2A-201ENST00000572844 SPA17Q15506 151 aa18.01■□□□□ 0.47
POLR2A-201ENST00000572844 BMT2Q1RMZ1 405 aa18.01■□□□□ 0.47
POLR2A-201ENST00000572844 PAPD7Q5XG87 772 aaKnown RBP18.01■□□□□ 0.47
POLR2A-201ENST00000572844 TRAPPC11Q7Z392 1133 aa18.01■□□□□ 0.47
POLR2A-201ENST00000572844 FAM207AQ9NSI2 230 aaPredicted RBP18.01■□□□□ 0.47
POLR2A-201ENST00000572844 EPHB6O15197 1021 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 DPEP1P16444 411 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 PSMC6P62333 389 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 KCNMA1Q12791 1236 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 PPP2R5CQ13362 524 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 PDXDC1Q6P996 788 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 NIM1KQ8IY84 436 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 MSANTD4Q8NCY6 345 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 SLC5A5Q92911 643 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 EIF2AK1Q9BQI3 630 aaKnown RBP18■□□□□ 0.47
POLR2A-201ENST00000572844 TBC1D7Q9P0N9 293 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 CEP72Q9P209 647 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 RABGAP1Q9Y3P9 1069 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 FHOD1Q9Y613 1164 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 SSU72P8A0A1W2PR75 194 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 ANO9A1A5B4 782 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 CETN3O15182 167 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
POLR2A-201ENST00000572844 PABPC4Q13310 644 aaKnown RBP eCLIP18■□□□□ 0.47
POLR2A-201ENST00000572844 MAPK8IP2Q13387 824 aaPredicted RBP18■□□□□ 0.47
POLR2A-201ENST00000572844 BRD3Q15059 726 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 UIMC1Q96RL1 719 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 HSD17B14Q9BPX1 270 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 REEP2Q9BRK0 252 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 PARD6BQ9BYG5 372 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 ARHGAP20Q9P2F6 1191 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 TRIM10Q9UDY6 481 aa18■□□□□ 0.47
POLR2A-201ENST00000572844 FER1L6Q2WGJ9 1857 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CTAGE15A4D2H0 777 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 PDXKO00764 312 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 PSMD10O75832 226 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 TUBBP07437 444 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CTAGE8P0CG41 777 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 GAP43P17677 238 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 KIF5AQ12840 1032 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 OTOP1Q7RTM1 612 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CTAGE6Q86UF2 777 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CTAGE4Q8IX94 777 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CYP2W1Q8TAV3 490 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 TANGO6Q9C0B7 1094 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 VEZTQ9HBM0 779 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
POLR2A-201ENST00000572844 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CCDC151A5D8V7 595 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 USO1O60763 962 aaKnown RBP17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CFBP00751 764 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 TAL1P17542 331 aaPredicted RBP17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
POLR2A-201ENST00000572844 ADAM9Q13443 819 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 KNOP1Q1ED39 458 aaKnown RBP17.99■□□□□ 0.47
POLR2A-201ENST00000572844 CC2D1AQ6P1N0 951 aaPredicted RBP17.99■□□□□ 0.47
POLR2A-201ENST00000572844 FRMD5Q7Z6J6 570 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 NELFCDQ8IXH7 590 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 TXLNBQ8N3L3 684 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 WDR18Q9BV38 432 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 LACRTQ9GZZ8 138 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 RAB21Q9UL25 225 aa17.99■□□□□ 0.47
POLR2A-201ENST00000572844 LRRC53A6NM62 1247 aa17.98■□□□□ 0.47
POLR2A-201ENST00000572844 EML1O00423 815 aa17.98■□□□□ 0.47
POLR2A-201ENST00000572844 ZNF263O14978 683 aa17.98■□□□□ 0.47
POLR2A-201ENST00000572844 CALUO43852 315 aaPredicted RBP17.98■□□□□ 0.47
POLR2A-201ENST00000572844 ASNSP08243 561 aa17.98■□□□□ 0.47
POLR2A-201ENST00000572844 PNMA6AP0CW24 399 aaPredicted RBP17.98■□□□□ 0.47
POLR2A-201ENST00000572844 RRAGAQ7L523 313 aa17.98■□□□□ 0.47
POLR2A-201ENST00000572844 HNRNPLLQ8WVV9 542 aaKnown RBP17.98■□□□□ 0.47
POLR2A-201ENST00000572844 TMEM39BQ9GZU3 492 aa17.98■□□□□ 0.47
POLR2A-201ENST00000572844 OLFML3Q9NRN5 406 aa17.98■□□□□ 0.47
POLR2A-201ENST00000572844 PUF60Q9UHX1 559 aaKnown RBP17.98■□□□□ 0.47
POLR2A-201ENST00000572844 RCCD1A6NED2 376 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 MEIS1O00470 390 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 EIF4A3P38919 411 aaKnown RBP17.97■□□□□ 0.47
POLR2A-201ENST00000572844 PTGER2P43116 358 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 KIF11P52732 1056 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 SETQ01105 290 aaPredicted RBP17.97■□□□□ 0.47
POLR2A-201ENST00000572844 GABPB1Q06547 395 aaPredicted RBP17.97■□□□□ 0.47
POLR2A-201ENST00000572844 ASTE1Q2TB18 679 aaPredicted RBP17.97■□□□□ 0.47
POLR2A-201ENST00000572844 CCDC174Q6PII3 467 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 CACNA2D4Q7Z3S7 1137 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 SFR1Q86XK3 245 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 GINM1Q9NU53 330 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 PCDHA13Q9Y5I0 950 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 SAR1BQ9Y6B6 198 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 PJA2O43164 708 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 NOL4O94818 638 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 PRELPP51888 382 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 CEP55Q53EZ4 464 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 LRCH2Q5VUJ6 765 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 TBC1D5Q92609 795 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 RPGRIP1Q96KN7 1286 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 WDR11Q9BZH6 1224 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 BHMT2Q9H2M3 363 aa17.97■□□□□ 0.47
POLR2A-201ENST00000572844 ANKZF1Q9H8Y5 726 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms