RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 NKX3-2P78367 333 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 TMEM266Q2M3C6 531 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 ZNF746Q6NUN9 644 aaPredicted RBP16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 MIER3Q7Z3K6 550 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 HAS1Q92839 578 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 GLT1D1Q96MS3 346 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 TTC12Q9H892 705 aaPredicted RBP16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 ELP1O95163 1332 aa16.37■□□□□ 0.21
NPLOC4-209ENST00000572760 GSTTP1A0A1W2PQM5 241 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 WDR64B1ANS9 1081 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 BACH1O14867 736 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 PSMD10O75832 226 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 CABYRO75952 493 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 TCF7P36402 384 aaPredicted RBP16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 JAK3P52333 1124 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 SF3A1Q15459 793 aaKnown RBP16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 MIS18BP1Q6P0N0 1132 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 CXCL17Q6UXB2 119 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 SMAP1Q8IYB5 467 aaPredicted RBP16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 MTG1Q9BT17 334 aaPredicted RBP16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 UNC45AQ9H3U1 944 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 AZI2Q9H6S1 392 aa16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 TRIP12Q14669 1992 aaPredicted RBP16.36■□□□□ 0.21
NPLOC4-209ENST00000572760 SCN10AQ9Y5Y9 1956 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 PSAPP07602 524 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 SFNP31947 248 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 FAM160B1Q5W0V3 765 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 NCAPH2Q6IBW4 605 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 DTHD1Q6ZMT9 781 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 GLG1Q92896 1179 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 PAWRQ96IZ0 340 aaKnown RBP16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 MTMR9Q96QG7 549 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 RAB34Q9BZG1 259 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 C11orf49Q9H6J7 331 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 STARD7Q9NQZ5 370 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 DISC1Q9NRI5 854 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 TFIP11Q9UBB9 837 aaKnown RBP16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 ZNF215Q9UL58 517 aaPredicted RBP16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 PHF24Q9UPV7 400 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 ZDHHC9Q9Y397 364 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 PCDHA10Q9Y5I2 948 aa16.35■□□□□ 0.21
NPLOC4-209ENST00000572760 CENPFP49454 3210 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 CCNE2O96020 404 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 LGALS2P05162 132 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 SUPT20HL2P0C7V6 817 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 ZNF286BP0CG31 522 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 TECP42680 631 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 ATP2C1P98194 919 aaPredicted RBP16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 PURAQ00577 322 aaKnown RBP16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 PPP2R5CQ13362 524 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 STK38Q15208 465 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 CCSAPQ6IQ19 270 aaPredicted RBP16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 C4orf32Q8N8J7 132 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 RDM1Q8NG50 284 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 USP28Q96RU2 1077 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 KATNAL1Q9BW62 490 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 SMARCAD1Q9H4L7 1026 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 TELO2Q9Y4R8 837 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 CLIC4Q9Y696 253 aa16.34■□□□□ 0.21
NPLOC4-209ENST00000572760 A0A1W2PQ45 241 aaPredicted RBP16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 A0A1W2PQY0 241 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 DDIT3P35638 169 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 PRPHP41219 470 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 STAT5BP51692 787 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 ATL3Q6DD88 541 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 SWSAP1Q6NVH7 229 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 ABHD15Q6UXT9 468 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 FTOQ9C0B1 505 aaKnown RBP eCLIP16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 ZNF302Q9NR11 478 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 CHMP5Q9NZZ3 219 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 VAV3Q9UKW4 847 aa16.33■□□□□ 0.2
NPLOC4-209ENST00000572760 H3BRB1 525 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 ATG7O95352 703 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 HOXD8P13378 290 aaPredicted RBP16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 PSEN2P49810 448 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 DNM1Q05193 864 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 EPHA7Q15375 998 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 ARL6IP4Q66PJ3 421 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 CKAP2LQ8IYA6 745 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 EVPLQ92817 2033 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 TUT1Q9H6E5 874 aaKnown RBP16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 ERAP1Q9NZ08 941 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 GABBR1Q9UBS5 961 aa16.32■□□□□ 0.2
NPLOC4-209ENST00000572760 EMSYQ7Z589 1322 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 A0A0U1RQG5 324 aaPredicted RBP16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 VWA3AA6NCI4 1184 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 POTEMA6NI47 508 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 EML1O00423 815 aa16.31■□□□□ 0.2
NPLOC4-209ENST00000572760 DKC1O60832 514 aaKnown RBP eCLIP16.31■□□□□ 0.22e-25■■■■□ 26.2
NPLOC4-209ENST00000572760 LGR5O75473 907 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms