RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SYCP3Q8IZU3 236 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 ZNF622Q969S3 477 aaKnown RBP eCLIP16.8■□□□□ 0.28
USP43-202ENST00000570475 TTYH3Q9C0H2 523 aa16.8■□□□□ 0.28
USP43-202ENST00000570475 RAD51CO43502 376 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 LRRN2O75325 713 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 HLA-DOAP06340 250 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 EMBQ6PCB8 327 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 CEP57Q86XR8 500 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 KIAA0825Q8IV33 1275 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 CHORDC1Q9UHD1 332 aaPredicted RBP16.79■□□□□ 0.28
USP43-202ENST00000570475 AMACRQ9UHK6 382 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 DNM3Q9UQ16 869 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 MYH7P12883 1935 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 PVALEFA0A1B0GWK0 134 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 GCOM1H8Y6P7 765 aaPredicted RBP16.79■□□□□ 0.28
USP43-202ENST00000570475 MYZAPP0CAP1 466 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 FECHP22830 423 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
USP43-202ENST00000570475 RNPC3Q96LT9 517 aaKnown RBP16.79■□□□□ 0.28
USP43-202ENST00000570475 CDCA7Q9BWT1 371 aaPredicted RBP16.79■□□□□ 0.28
USP43-202ENST00000570475 ATP6V0A2Q9Y487 856 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 CORO7P57737 925 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 CPLX4Q7Z7G2 160 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 SFR1Q86XK3 245 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 CEP89Q96ST8 783 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 BHMT2Q9H2M3 363 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 RIC8AQ9NPQ8 531 aa16.79■□□□□ 0.28
USP43-202ENST00000570475 GDF11O95390 407 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 ZNF211Q13398 564 aaPredicted RBP16.78■□□□□ 0.28
USP43-202ENST00000570475 GRAPQ13588 217 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 ZFYVE27Q5T4F4 411 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 EFCAB13Q8IY85 973 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 MMGT1Q8N4V1 131 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
USP43-202ENST00000570475 MYH6P13533 1939 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 A0A087WUV0 522 aaPredicted RBP16.78■□□□□ 0.28
USP43-202ENST00000570475 PTK2Q05397 1052 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 TTMPQ5BVD1 217 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
USP43-202ENST00000570475 CCDC114Q96M63 670 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 IKZF4Q9H2S9 585 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 CEP72Q9P209 647 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 SERPINB13Q9UIV8 391 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 ATP8A1Q9Y2Q0 1164 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 EIF3HO15372 352 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP43-202ENST00000570475 FAM13AO94988 1023 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 TMOD1P28289 359 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 KCNMA1Q12791 1236 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 CELF4Q9BZC1 486 aaKnown RBP16.78■□□□□ 0.28
USP43-202ENST00000570475 MTMR4Q9NYA4 1195 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 LEMD3Q9Y2U8 911 aa16.78■□□□□ 0.28
USP43-202ENST00000570475 CFBP00751 764 aa16.77■□□□□ 0.28
USP43-202ENST00000570475 CASKIN2Q8WXE0 1202 aa16.77■□□□□ 0.28
USP43-202ENST00000570475 NOVA2Q9UNW9 492 aaKnown RBP16.77■□□□□ 0.28
USP43-202ENST00000570475 DCCP43146 1447 aa16.77■□□□□ 0.28
USP43-202ENST00000570475 ALS2Q96Q42 1657 aa16.77■□□□□ 0.28
USP43-202ENST00000570475 SPATA31A1Q5TZJ5 1347 aa16.77■□□□□ 0.28
USP43-202ENST00000570475 TTLL1O95922 423 aa16.77■□□□□ 0.27
USP43-202ENST00000570475 JMJD4Q9H9V9 463 aa16.77■□□□□ 0.27
USP43-202ENST00000570475 MYO1FO00160 1098 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 DAPK3O43293 454 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 PPP1R12BO60237 982 aaPredicted RBP16.76■□□□□ 0.27
USP43-202ENST00000570475 AARSP49588 968 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP43-202ENST00000570475 ERMNQ8TAM6 284 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 SCLT1Q96NL6 688 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 NT5C3AQ9H0P0 336 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 RPS6KA4O75676 772 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 EPB41P11171 864 aaKnown RBP16.76■□□□□ 0.27
USP43-202ENST00000570475 PSMC6P62333 389 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 CTTNQ14247 550 aaKnown RBP16.76■□□□□ 0.27
USP43-202ENST00000570475 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 RTFDC1Q9BY42 306 aaPredicted RBP16.76■□□□□ 0.27
USP43-202ENST00000570475 BCAS3Q9H6U6 928 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 RGL1Q9NZL6 768 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 GCNT4Q9P109 453 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 PNMA6FA0A0J9YX94 578 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 A0A1W2PQJ5 194 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 SHROOM1Q2M3G4 852 aaPredicted RBP16.76■□□□□ 0.27
USP43-202ENST00000570475 CCDC121Q6ZUS5 278 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 AMIGO3Q86WK7 504 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 DAGLBQ8NCG7 672 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 BAP1Q92560 729 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 SH2D3AQ9BRG2 576 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 TSKSQ9UJT2 592 aa16.76■□□□□ 0.27
USP43-202ENST00000570475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.75■□□□□ 0.27
USP43-202ENST00000570475 BUB1BO60566 1050 aaPredicted RBP16.75■□□□□ 0.27
USP43-202ENST00000570475 FLOT1O75955 427 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 SLCO1A2P46721 670 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 DHX9Q08211 1270 aaKnown RBP16.75■□□□□ 0.27
USP43-202ENST00000570475 ALS2CLQ60I27 953 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 ICE2Q659A1 982 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 C16orf86Q6ZW13 317 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 B4GALNT4Q76KP1 1039 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 CABS1Q96KC9 395 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 MYH13Q9UKX3 1938 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 TLR2O60603 784 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms