RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 GIMAP8Q8ND71 665 aaPredicted RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 FGFR1OP2Q9NVK5 253 aa11.87□□□□□ -0.51
PALB2-206ENST00000568219 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
PALB2-206ENST00000568219 CAND2O75155 1236 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 USP17L2Q6R6M4 530 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 TRPM8Q7Z2W7 1104 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 KRT25Q7Z3Z0 450 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 SYCE1Q8N0S2 351 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 VPS52Q8N1B4 723 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 TAB3Q8N5C8 712 aaPredicted RBP11.86□□□□□ -0.51
PALB2-206ENST00000568219 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
PALB2-206ENST00000568219 MCUR1Q96AQ8 359 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 BCS1LQ9Y276 419 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 GRIN2DO15399 1336 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 ZNF263O14978 683 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 CYP4F22Q6NT55 531 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 PDXDC1Q6P996 788 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 RFX8Q6ZV50 586 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 USP38Q8NB14 1042 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 TMBIM4Q9HC24 238 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 PLEKHG1Q9ULL1 1385 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 WDR91A4D1P6 747 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 F8W031 263 aaPredicted RBP11.86□□□□□ -0.51
PALB2-206ENST00000568219 GCNT3O95395 438 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 ATP6V1G2O95670 118 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 EEF2P13639 858 aaKnown RBP11.86□□□□□ -0.51
PALB2-206ENST00000568219 ERVK-9P63128 1117 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 DRP2Q13474 957 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 NLRP10Q86W26 655 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 COA7Q96BR5 231 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 PBKQ96KB5 322 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 TMOD4Q9NZQ9 345 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 CHORDC1Q9UHD1 332 aaPredicted RBP11.86□□□□□ -0.51
PALB2-206ENST00000568219 CDC42BPGQ6DT37 1551 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 MROH5Q6ZUA9 1318 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 PDE6CP51160 858 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 IRX1P78414 480 aaPredicted RBP11.86□□□□□ -0.51
PALB2-206ENST00000568219 CYP4A11Q02928 519 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 ZSCAN29Q8IWY8 852 aaPredicted RBP11.86□□□□□ -0.51
PALB2-206ENST00000568219 TGFBRAP1Q8WUH2 860 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 IQCDQ96DY2 449 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 MTRQ99707 1265 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 PCDHA12Q9UN75 941 aa11.86□□□□□ -0.51
PALB2-206ENST00000568219 DLG5Q8TDM6 1919 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 MEIS1O00470 390 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 AP1G2O75843 785 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 RHOBTB3O94955 611 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 MSH2P43246 934 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 PMS2P54278 862 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 RAD23BP54727 409 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 PHLDB2Q86SQ0 1253 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 ANKS1AQ92625 1134 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 CAVIN3Q969G5 261 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 OSBPL7Q9BZF2 842 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 VCXQ9H320 206 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 DLC1Q96QB1 1528 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 DCDC2CA8MYV0 355 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 POC1B-GALNT4F8VUJ3 575 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 THAP12O43422 761 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 DDAH1O94760 285 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 BAG2O95816 211 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 EPB41P11171 864 aaKnown RBP11.85□□□□□ -0.51
PALB2-206ENST00000568219 GSCP56915 257 aaPredicted RBP11.85□□□□□ -0.51
PALB2-206ENST00000568219 CHRNDQ07001 517 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 SLC29A2Q14542 456 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 PKN1Q16512 942 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 PFKFB3Q16875 520 aaPredicted RBP11.85□□□□□ -0.51
PALB2-206ENST00000568219 SCYL3Q8IZE3 742 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 IQCKQ8N0W5 287 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 FBXL16Q8N461 479 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 GBP5Q96PP8 586 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■□□□ 12.7
PALB2-206ENST00000568219 G3BP2Q9UN86 482 aaKnown RBP11.85□□□□□ -0.51
PALB2-206ENST00000568219 CHMP2AO43633 222 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 PLCG2P16885 1265 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 CYP2J2P51589 502 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 PSMD2Q13200 908 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 HP1BP3Q5SSJ5 553 aaPredicted RBP11.85□□□□□ -0.51
PALB2-206ENST00000568219 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 SRRM1Q8IYB3 904 aaKnown RBP11.85□□□□□ -0.51
PALB2-206ENST00000568219 UBL4BQ8N7F7 174 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 DUSP9Q99956 384 aaKnown RBP11.85□□□□□ -0.51
PALB2-206ENST00000568219 SH3GL3Q99963 347 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 SALL4Q9UJQ4 1053 aa11.85□□□□□ -0.51
PALB2-206ENST00000568219 UBOX5O94941 541 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
PALB2-206ENST00000568219 PSEN1P49768 467 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 ITGB3BPQ13352 177 aaPredicted RBP11.84□□□□□ -0.51
PALB2-206ENST00000568219 THEMIS2Q5TEJ8 643 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 SLC44A5Q8NCS7 719 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 ISCUQ9H1K1 167 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.84□□□□□ -0.51
PALB2-206ENST00000568219 TMEM260Q9NX78 707 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 MCM8Q9UJA3 840 aa11.84□□□□□ -0.51
PALB2-206ENST00000568219 LUC7L3O95232 432 aaKnown RBP11.84□□□□□ -0.51
PALB2-206ENST00000568219 BAG3O95817 575 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms