RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PRR23BQ6ZRT6 265 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 IRF2BP1Q8IU81 584 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 FIBCD1Q8N539 461 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 PANK1Q8TE04 598 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 HHIPL1Q96JK4 782 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 KLHL25Q9H0H3 589 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 GBP3Q9H0R5 595 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 IGSF5Q9NSI5 407 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 IFT57Q9NWB7 429 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 WHRNQ9P202 907 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 RRP7AQ9Y3A4 280 aaKnown RBP6.52□□□□□ -1.37
CAPN3-217ENST00000567817 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
CAPN3-217ENST00000567817 C5P01031 1676 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 USP54Q70EL1 1684 aa6.52□□□□□ -1.37
CAPN3-217ENST00000567817 NOTOA8MTQ0 251 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 IGHDP01880 384 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 SSBP05455 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
CAPN3-217ENST00000567817 C8AP07357 584 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 GNAI1P63096 354 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 HTRA3P83110 453 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 SLC14A2Q15849 920 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 TNNI3KQ59H18 835 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 ZNF648Q5T619 568 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-217ENST00000567817 HEATR6Q6AI08 1181 aaKnown RBP6.51□□□□□ -1.37
CAPN3-217ENST00000567817 CEP128Q6ZU80 1094 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 KSR1Q8IVT5 923 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 BHLHE22Q8NFJ8 381 aaPredicted RBP6.51□□□□□ -1.37
CAPN3-217ENST00000567817 KLHL6Q8WZ60 621 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 BRF1Q92994 677 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 COG3Q96JB2 828 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 SLC38A3Q99624 504 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 CDADC1Q9BWV3 514 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 EPB41L4BQ9H329 900 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 NSUN3Q9H649 340 aaKnown RBP6.51□□□□□ -1.37
CAPN3-217ENST00000567817 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 ERVK13-1Q9NX77 482 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 PCDHB10Q9UN67 800 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 YBX2Q9Y2T7 364 aaKnown RBP6.51□□□□□ -1.37
CAPN3-217ENST00000567817 KIF24Q5T7B8 1368 aa6.51□□□□□ -1.37
CAPN3-217ENST00000567817 KIF13BQ9NQT8 1826 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 RGPD5Q99666 1765 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 FADS2P1A8MWK0 482 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 PSPNO60542 156 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 TRIM27P14373 513 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 NOP2P46087 812 aaKnown RBP6.5□□□□□ -1.37
CAPN3-217ENST00000567817 CTCFP49711 727 aaPredicted RBP6.5□□□□□ -1.37
CAPN3-217ENST00000567817 RGS19P49795 217 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 EXOSC9Q06265 439 aaKnown RBP6.5□□□□□ -1.37
CAPN3-217ENST00000567817 NFE2L2Q16236 605 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 RTP2Q5QGT7 225 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 VHLLQ6RSH7 139 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 NLRX1Q86UT6 975 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 SMC5Q8IY18 1101 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 FBXO15Q8NCQ5 510 aaPredicted RBP6.5□□□□□ -1.37
CAPN3-217ENST00000567817 GCC1Q96CN9 775 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 SHISA4Q96DD7 197 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 INTS4Q96HW7 963 aaKnown RBP6.5□□□□□ -1.37
CAPN3-217ENST00000567817 DIRC2Q96SL1 478 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 PPP1R16BQ96T49 567 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 SLC12A9Q9BXP2 914 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 NOL6Q9H6R4 1146 aaKnown RBP6.5□□□□□ -1.37
CAPN3-217ENST00000567817 POLKQ9UBT6 870 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 DIS3Q9Y2L1 958 aaKnown RBP6.5□□□□□ -1.37
CAPN3-217ENST00000567817 PKD1L3Q7Z443 1732 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 DOT1LQ8TEK3 1739 aa6.5□□□□□ -1.37
CAPN3-217ENST00000567817 EPHX1P07099 455 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 FGRP09769 529 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 PRKAR2BP31323 418 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 RTP1P59025 263 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 POU4F1Q01851 419 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 ARID5AQ03989 594 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 PKN1Q16512 942 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 GALNT18Q6P9A2 607 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 CYP2R1Q6VVX0 501 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.49□□□□□ -1.37
CAPN3-217ENST00000567817 API5Q9BZZ5 524 aaKnown RBP6.49□□□□□ -1.37
CAPN3-217ENST00000567817 DCP1AQ9NPI6 582 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-217ENST00000567817 CRTAC1Q9NQ79 661 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 GPR55Q9Y2T6 319 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-217ENST00000567817 KCPQ6ZWJ8 1503 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 TTC21BQ7Z4L5 1316 aa6.49□□□□□ -1.37
CAPN3-217ENST00000567817 KIF20BQ96Q89 1820 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 A0A1W2PQ45 241 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-217ENST00000567817 A0A1W2PQY0 241 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 WTIPA6NIX2 430 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-217ENST00000567817 PPM1BO75688 479 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 GSTM1P09488 218 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 NAT2P11245 290 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 VEGFAP15692 232 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-217ENST00000567817 IL13P35225 146 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 ZNF143P52747 638 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-217ENST00000567817 NCAPHQ15003 741 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 HSF5Q4G112 596 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-217ENST00000567817 KIAA1211LQ6NV74 962 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 SLCO6A1Q86UG4 719 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 ITPRIPQ8IWB1 547 aa6.48□□□□□ -1.37
CAPN3-217ENST00000567817 SLC43A3Q8NBI5 491 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms