RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CLEC4DQ8WXI8 215 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 CNOT6LQ96LI5 555 aaKnown RBP25.8■■□□□ 1.72
LINC00543-201ENST00000567234 TUFT1Q9NNX1 390 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 EMILIN3Q9NT22 766 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 RPTORQ8N122 1335 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 VCAM1P19320 739 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 CASP14P31944 242 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 SAMD1Q6SPF0 538 aaPredicted RBP25.79■■□□□ 1.72
LINC00543-201ENST00000567234 KRT26Q7Z3Y9 468 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 TSG101Q99816 390 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 EIF2AK1Q9BQI3 630 aaKnown RBP25.79■■□□□ 1.72
LINC00543-201ENST00000567234 FHOD1Q9Y613 1164 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 MTMR2Q13614 643 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 LRCH2Q5VUJ6 765 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 WDR11Q9BZH6 1224 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 TANGO6Q9C0B7 1094 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 ZNF446Q9NWS9 450 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.79■■□□□ 1.72
LINC00543-201ENST00000567234 FZD1Q9UP38 647 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 PCDHA2Q9Y5H9 948 aa25.79■■□□□ 1.72
LINC00543-201ENST00000567234 BCRP11274 1271 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 EPHX2P34913 555 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 BACE1P56817 501 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 ARSHQ5FYA8 562 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 NIPA1Q7RTP0 329 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 PPP2R2CQ9Y2T4 447 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 LOXHD1Q8IVV2 1947 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 SCN4AP35499 1836 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 PHIPQ8WWQ0 1821 aa25.78■■□□□ 1.72
LINC00543-201ENST00000567234 FLOT1O75955 427 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 ZRANB2O95218 330 aaKnown RBP eCLIP25.77■■□□□ 1.72
LINC00543-201ENST00000567234 FXR1P51114 621 aaKnown RBP eCLIP25.77■■□□□ 1.72
LINC00543-201ENST00000567234 GPS2Q13227 327 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 REXO1L1PQ8IX06 675 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 ZNF280CQ8ND82 737 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 HSD17B14Q9BPX1 270 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 PICK1Q9NRD5 415 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 EYA4O95677 639 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 MTIF2P46199 727 aaKnown RBP25.77■■□□□ 1.72
LINC00543-201ENST00000567234 SPP2Q13103 211 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 RETREG2Q8NC44 543 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 CPLX3Q8WVH0 158 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 C12orf42Q96LP6 360 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 MXRA8Q9BRK3 442 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 NUP58Q9BVL2 599 aa25.77■■□□□ 1.72
LINC00543-201ENST00000567234 RPAP3Q9H6T3 665 aaPredicted RBP25.77■■□□□ 1.72
LINC00543-201ENST00000567234 EML1O00423 815 aa25.76■■□□□ 1.71
LINC00543-201ENST00000567234 ZBED4O75132 1171 aa25.76■■□□□ 1.71
LINC00543-201ENST00000567234 KRT18P05783 430 aaKnown RBP25.76■■□□□ 1.71
LINC00543-201ENST00000567234 PTPRAP18433 802 aa25.76■■□□□ 1.71
LINC00543-201ENST00000567234 IQCDQ96DY2 449 aa25.76■■□□□ 1.71
LINC00543-201ENST00000567234 WRNIP1Q96S55 665 aa25.76■■□□□ 1.71
LINC00543-201ENST00000567234 RIT2Q99578 217 aa25.76■■□□□ 1.71
LINC00543-201ENST00000567234 WDR90Q96KV7 1748 aa25.76■■□□□ 1.71
LINC00543-201ENST00000567234 GAS7O60861 476 aa25.75■■□□□ 1.71
LINC00543-201ENST00000567234 PNMA6AP0CW24 399 aaPredicted RBP25.75■■□□□ 1.71
LINC00543-201ENST00000567234 PSMC6P62333 389 aa25.75■■□□□ 1.71
LINC00543-201ENST00000567234 ZCWPW2Q504Y3 356 aa25.75■■□□□ 1.71
LINC00543-201ENST00000567234 HERC4Q5GLZ8 1057 aaPredicted RBP25.75■■□□□ 1.71
LINC00543-201ENST00000567234 TMTC1Q8IUR5 882 aa25.75■■□□□ 1.71
LINC00543-201ENST00000567234 UBXN6Q9BZV1 441 aa25.75■■□□□ 1.71
LINC00543-201ENST00000567234 SSC5DA1L4H1 1573 aa25.75■■□□□ 1.71
LINC00543-201ENST00000567234 FRMPD4Q14CM0 1322 aa25.75■■□□□ 1.71
LINC00543-201ENST00000567234 C19orf81C9J6K1 198 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 ADM5C9JUS6 153 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 NFIBO00712 420 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 GIT2Q14161 759 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 TMCO3Q6UWJ1 677 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 ERGIC2Q96RQ1 377 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 ZNF577Q9BSK1 485 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 NOC4LQ9BVI4 516 aaKnown RBP25.74■■□□□ 1.71
LINC00543-201ENST00000567234 ABHD10Q9NUJ1 306 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 CTDP1Q9Y5B0 961 aaPredicted RBP25.74■■□□□ 1.71
LINC00543-201ENST00000567234 RLFQ13129 1914 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 B4DLN1 442 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 ALAS1P13196 640 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 ETF1P62495 437 aaKnown RBP25.74■■□□□ 1.71
LINC00543-201ENST00000567234 FKBP3Q00688 224 aaKnown RBP25.74■■□□□ 1.71
LINC00543-201ENST00000567234 TBC1D8BQ0IIM8 1120 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 PABPC4Q13310 644 aaKnown RBP eCLIP25.74■■□□□ 1.71
LINC00543-201ENST00000567234 MIIPQ5JXC2 388 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 B3GNT9Q6UX72 402 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 LRRC55Q6ZSA7 311 aa25.74■■□□□ 1.71
LINC00543-201ENST00000567234 TAF1DQ9H5J8 278 aaPredicted RBP25.74■■□□□ 1.71
LINC00543-201ENST00000567234 RAVER2Q9HCJ3 691 aaKnown RBP25.74■■□□□ 1.71
LINC00543-201ENST00000567234 UBXN2AP68543 259 aa25.73■■□□□ 1.71
LINC00543-201ENST00000567234 LRRC41Q15345 812 aa25.73■■□□□ 1.71
LINC00543-201ENST00000567234 NOL9Q5SY16 702 aaKnown RBP25.73■■□□□ 1.71
LINC00543-201ENST00000567234 CPXCR1Q8N123 301 aa25.73■■□□□ 1.71
LINC00543-201ENST00000567234 KLRG1Q96E93 195 aa25.73■■□□□ 1.71
LINC00543-201ENST00000567234 CEP63Q96MT8 703 aa25.73■■□□□ 1.71
LINC00543-201ENST00000567234 TEKT3Q9BXF9 490 aa25.73■■□□□ 1.71
LINC00543-201ENST00000567234 CAPN11Q9UMQ6 739 aa25.73■■□□□ 1.71
LINC00543-201ENST00000567234 PES1O00541 588 aaKnown RBP25.72■■□□□ 1.71
LINC00543-201ENST00000567234 SLITRK3O94933 977 aa25.72■■□□□ 1.71
LINC00543-201ENST00000567234 KRT9P35527 623 aa25.72■■□□□ 1.71
LINC00543-201ENST00000567234 CLCN6P51797 869 aa25.72■■□□□ 1.71
LINC00543-201ENST00000567234 EPHA7Q15375 998 aa25.72■■□□□ 1.71
LINC00543-201ENST00000567234 MAN2A1Q16706 1144 aa25.72■■□□□ 1.71
LINC00543-201ENST00000567234 SUPT20HL1Q3ZLR7 823 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms