RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 CHD9Q3L8U1 2897 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 REV3LO60673 3130 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 POTEMA6NI47 508 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 ASB14A6NK59 587 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 IPO5O00410 1097 aaKnown RBP12.47□□□□□ -0.41
SF3B3-205ENST00000564899 GAS7O60861 476 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 NR1I2O75469 434 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 UBA7P41226 1012 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 SYKP43405 635 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 MORN1Q5T089 497 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 LRCH2Q5VUJ6 765 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 FAM109BQ6ICB4 259 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-205ENST00000564899 DPP9Q86TI2 863 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 FMR1NBQ8N0W7 255 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-205ENST00000564899 IGSF22Q8N9C0 903 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 ENGASEQ8NFI3 743 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 SYAP1Q96A49 352 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-205ENST00000564899 CDHR1Q96JP9 859 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 NUDT12Q9BQG2 462 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 TEKT3Q9BXF9 490 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
SF3B3-205ENST00000564899 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
SF3B3-205ENST00000564899 SLC5A4Q9NY91 659 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 PKD2L1Q9P0L9 805 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 LRWD1Q9UFC0 647 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 VAV3Q9UKW4 847 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 LCTP09848 1927 aa12.47□□□□□ -0.41
SF3B3-205ENST00000564899 MAFGO15525 162 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 KINO60870 393 aaKnown RBP12.46□□□□□ -0.41
SF3B3-205ENST00000564899 PSMD10O75832 226 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 RGS20O76081 388 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
SF3B3-205ENST00000564899 CDC25AP30304 524 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 MAP2K5Q13163 448 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 SNW1Q13573 536 aaKnown RBP12.46□□□□□ -0.41
SF3B3-205ENST00000564899 PDIA5Q14554 519 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 SHHQ15465 462 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 KRT79Q5XKE5 535 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 NCAPH2Q6IBW4 605 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 SEPT14Q6ZU15 432 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 ARMCX2Q7L311 632 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 ZNF467Q7Z7K2 595 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-205ENST00000564899 CABP7Q86V35 215 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 TRPV1Q8NER1 839 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 RASSF8Q8NHQ8 419 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 MORC4Q8TE76 937 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 SNX29Q8TEQ0 813 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 SOCS4Q8WXH5 440 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 MYLIPQ8WY64 445 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 RIT2Q99578 217 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 SENP6Q9GZR1 1112 aaPredicted RBP12.46□□□□□ -0.41
SF3B3-205ENST00000564899 TMEM63CQ9P1W3 806 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 DIS3Q9Y2L1 958 aaKnown RBP12.46□□□□□ -0.41
SF3B3-205ENST00000564899 XIRP2A4UGR9 3374 aa12.46□□□□□ -0.41
SF3B3-205ENST00000564899 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.42
SF3B3-205ENST00000564899 DDX39AO00148 427 aaKnown RBP12.45□□□□□ -0.42
SF3B3-205ENST00000564899 POLR2DO15514 142 aaKnown RBP12.45□□□□□ -0.42
SF3B3-205ENST00000564899 CHMP2AO43633 222 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 ZNF202O95125 648 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 ICAM3P32942 547 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 RGS2P41220 211 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 SPIRE1Q08AE8 756 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 SEMA3FQ13275 785 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 ITGB3BPQ13352 177 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-205ENST00000564899 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
SF3B3-205ENST00000564899 ZRSR1Q15695 479 aaKnown RBP12.45□□□□□ -0.42
SF3B3-205ENST00000564899 CCDC183Q5T5S1 534 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 EEPD1Q7L9B9 569 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 PDILTQ8N807 584 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 MAFAQ8NHW3 353 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-205ENST00000564899 MAML3Q96JK9 1138 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
SF3B3-205ENST00000564899 PANK2Q9BZ23 570 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 NUP62CLQ9H1M0 184 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 PRDM6Q9NQX0 595 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 CCDC39Q9UFE4 941 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 TCEAL9Q9UHQ7 104 aa12.45□□□□□ -0.42
SF3B3-205ENST00000564899 CHD7Q9P2D1 2997 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 A0A087X0B3 334 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 SPATA31C2B4DYI2 1134 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 ATP9AO75110 1047 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 HOXC6P09630 235 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 PPP2R5CQ13362 524 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 ZNF697Q5TEC3 545 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 HAUS3Q68CZ6 603 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-205ENST00000564899 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 ERMNQ8TAM6 284 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 NPLOC4Q8TAT6 608 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 DHX58Q96C10 678 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 CALML4Q96GE6 196 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 CDK5RAP3Q96JB5 506 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 APBA2Q99767 749 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
SF3B3-205ENST00000564899 MMTAG2Q9BU76 263 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms