RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ERVK-21P61565 698 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 DEFB103AP81534 67 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 UTP14CQ5TAP6 766 aaKnown RBP13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 MCTP2Q6DN12 878 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 FAM43BQ6ZT52 329 aaPredicted RBP13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 RSPH3Q86UC2 560 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 IL27Q8NEV9 243 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 DBF4BQ8NFT6 615 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 KCNB2Q92953 911 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 TGS1Q96RS0 853 aaKnown RBP13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 COG5Q9UP83 839 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 V9GY48 417 aaPredicted RBP13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 KAT6AQ92794 2004 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 NCOR1O75376 2440 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 GSTTP1A0A1W2PQM5 241 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 RRN3P2A6NIE6 340 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 NAPAP54920 295 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 ARHGAP4P98171 946 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 FUT2Q10981 343 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 COL9A3Q14050 684 aaPredicted RBP13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 RASEFQ8IZ41 740 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 FBXL16Q8N461 479 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 GLG1Q92896 1179 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 MXRA8Q9BRK3 442 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 CERS4Q9HA82 394 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 BARHL2Q9NY43 387 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 PRRC2BQ5JSZ5 2229 aaKnown RBP13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 TRANK1O15050 2925 aa13.94□□□□□ -0.18
GTF3C1-204ENST00000564664 NFASCO94856 1347 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 SMCO2A6NFE2 343 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 TNFRSF10AO00220 468 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 RFXAPO00287 272 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 ADCY7P51828 1080 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 HTRA4P83105 476 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 FGD1P98174 961 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 GRB10Q13322 594 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 AP3B2Q13367 1082 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 UBE2SQ16763 222 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 TCTN1Q2MV58 587 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 WWC2Q6AWC2 1192 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 NIPA1Q7RTP0 329 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 TOP1MTQ969P6 601 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 SAMD11Q96NU1 681 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 SDF4Q9BRK5 362 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 AZI2Q9H6S1 392 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 JPH1Q9HDC5 661 aaPredicted RBP13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 KCNH7Q9NS40 1196 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 BRPF3Q9ULD4 1205 aa13.93□□□□□ -0.18
GTF3C1-204ENST00000564664 CNTNAP5Q8WYK1 1306 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 MBLAC1A4D2B0 266 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 EPOPA6NHQ4 379 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 GOLGA8AA7E2F4 631 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 GOLGA8BA8MQT2 603 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 MEIS1O00470 390 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 EPB41L2O43491 1005 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 SLC26A2P50443 739 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 SP4Q02446 784 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 PPFIA1Q13136 1202 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 ADCK5Q3MIX3 580 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 CEP55Q53EZ4 464 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 PLPPR4Q7Z2D5 763 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 TRIM50Q86XT4 487 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 MICALL1Q8N3F8 863 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 CCDC12Q8WUD4 166 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 FAM217BQ9NTX9 383 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 SLC9A2Q9UBY0 812 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 SQORQ9Y6N5 450 aa13.92□□□□□ -0.18
GTF3C1-204ENST00000564664 KLF18A0A0U1RQI7 1052 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 LCHNA4D1U4 455 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 LINC01553A4QN01 128 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 STXBP3O00186 592 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 LPXNO60711 386 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 ARHGEF15O94989 841 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 REC8O95072 547 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 HSPA4P34932 840 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 CLK2P49760 499 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 SKIV2LQ15477 1246 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 GRIK4Q16099 956 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 MYOCDQ8IZQ8 938 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 NME8Q8N427 588 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 HLA-CQ95604 372 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 IFIH1Q9BYX4 1025 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
GTF3C1-204ENST00000564664 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 ATG7O95352 703 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 CHRNA1P02708 482 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 CYP3A4P08684 503 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 BMP1P13497 986 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 PSMA5P28066 241 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 ZNF76P36508 570 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 SREBF1P36956 1147 aa13.9□□□□□ -0.18
GTF3C1-204ENST00000564664 METAP2P50579 478 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms