RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 SLC26A4O43511 780 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 NSUN6Q8TEA1 469 aaKnown RBP19.71■□□□□ 0.75
GDE1-203ENST00000564172 NT5C3AQ9H0P0 336 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 CCL15-CCL14A0A0B4J2E2 113 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 ADCY5O95622 1261 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 NR3C2P08235 984 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 CCL15Q16663 113 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 SPRYD7Q5W111 196 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 HAUS3Q68CZ6 603 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 XRRA1Q6P2D8 792 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 FAM43BQ6ZT52 329 aaPredicted RBP19.71■□□□□ 0.75
GDE1-203ENST00000564172 KCNK18Q7Z418 384 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 VSIG10LQ86VR7 867 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 NCAPG2Q86XI2 1143 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 ANKRD35Q8N283 1001 aa19.71■□□□□ 0.75
GDE1-203ENST00000564172 LARP4BQ92615 738 aaKnown RBP19.71■□□□□ 0.75
GDE1-203ENST00000564172 BECN2A8MW95 431 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 GAS7O60861 476 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 MED24O75448 989 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 PPP2R5CQ13362 524 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 Q3C1V9 767 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 KMT5BQ4FZB7 885 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 SYT10Q6XYQ8 523 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 SV2BQ7L1I2 683 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 RPAINQ86UA6 219 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 MLKLQ8NB16 471 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 ERMNQ8TAM6 284 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 BRI3BPQ8WY22 251 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 RAD54LQ92698 747 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 DEF6Q9H4E7 631 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 CXorf56Q9H5V9 222 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 PNMA3Q9UL41 463 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 STK24Q9Y6E0 443 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 POTEB3A0JP26 581 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 EML1O00423 815 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 RPN1P04843 607 aaKnown RBP19.7■□□□□ 0.74
GDE1-203ENST00000564172 ZBTB48P10074 688 aaPredicted RBP19.7■□□□□ 0.74
GDE1-203ENST00000564172 CYP2C8P10632 490 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 RPA1P27694 616 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 AMPD3Q01432 767 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 POTEBQ6S5H4 581 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 CATSPER3Q86XQ3 398 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 AOPEPQ8N6M6 819 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 RIT2Q99578 217 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 TRIM9Q9C026 710 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 KIAA1024Q9UPX6 916 aa19.7■□□□□ 0.74
GDE1-203ENST00000564172 BTBD19C9JJ37 291 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 GOLGA6L19H0YKK7 550 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 SLC25A27O95847 323 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 SPATA31C1P0DKV0 1188 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 ERCC3P19447 782 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 CCND2P30279 289 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 HUNKP57058 714 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 MTMR1Q13613 665 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 DHX8Q14562 1220 aaKnown RBP19.69■□□□□ 0.74
GDE1-203ENST00000564172 MCM6Q14566 821 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 C7orf25Q9BPX7 421 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 SLC45A1Q9Y2W3 748 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 PFASO15067 1338 aa19.69■□□□□ 0.74
GDE1-203ENST00000564172 PDHXO00330 501 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 B3GNT9Q6UX72 402 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 C10orf67Q8IYJ2 551 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 CCDC112Q8NEF3 446 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 R3HDMLQ9H3Y0 253 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 AGO4Q9HCK5 861 aaKnown RBP19.68■□□□□ 0.74
GDE1-203ENST00000564172 AP5Z1O43299 807 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 CLSTN1O94985 981 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 SUGP1Q8IWZ8 645 aaKnown RBP19.68■□□□□ 0.74
GDE1-203ENST00000564172 GPATCH11Q8N954 259 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 EIF2AK1Q9BQI3 630 aaKnown RBP19.68■□□□□ 0.74
GDE1-203ENST00000564172 TEKT3Q9BXF9 490 aa19.68■□□□□ 0.74
GDE1-203ENST00000564172 DHX15O43143 795 aaKnown RBP19.67■□□□□ 0.74
GDE1-203ENST00000564172 KLRC4O43908 158 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 PLCB2Q00722 1185 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 CNTN2Q02246 1040 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 ANKRD23Q86SG2 305 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 DNERQ8NFT8 737 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 TMX1Q9H3N1 280 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 UNC45AQ9H3U1 944 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 RMND1Q9NWS8 449 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 PKD2L1Q9P0L9 805 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 DACH1Q9UI36 760 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 TESPA1A2RU30 521 aaPredicted RBP19.67■□□□□ 0.74
GDE1-203ENST00000564172 E9PMD0 336 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 CHMP2AO43633 222 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 COPB2P35606 906 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 KCNB1Q14721 858 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 NCAPHQ15003 741 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 HSD17B14Q9BPX1 270 aa19.67■□□□□ 0.74
GDE1-203ENST00000564172 POLR3CQ9BUI4 534 aaPredicted RBP19.67■□□□□ 0.74
GDE1-203ENST00000564172 POTEFA5A3E0 1075 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 ERVK-9P63128 1117 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 ERVK-24P63145 666 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 ITGB3BPQ13352 177 aaPredicted RBP19.66■□□□□ 0.74
GDE1-203ENST00000564172 POTEGQ6S5H5 508 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 SMCR8Q8TEV9 937 aaPredicted RBP19.66■□□□□ 0.74
GDE1-203ENST00000564172 GTF3C2Q8WUA4 911 aaPredicted RBP19.66■□□□□ 0.74
GDE1-203ENST00000564172 INPP4AQ96PE3 977 aaPredicted RBP19.66■□□□□ 0.74
GDE1-203ENST00000564172 RGL1Q9NZL6 768 aa19.66■□□□□ 0.74
GDE1-203ENST00000564172 MYMKA6NI61 221 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms