RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 PPP2R3BQ9Y5P8 575 aa7.13□□□□□ -1.27
TCF4-220ENST00000563824 RGS13O14921 159 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 SART1O43290 800 aaKnown RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 KCNQ3O43525 872 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 GAS2O43903 313 aaKnown RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 DNAJC6O75061 913 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 ARHGEF15O94989 841 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 TP53P04637 393 aaPredicted RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 DRD2P14416 443 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 ELNP15502 786 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 HOXB4P17483 251 aaPredicted RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 RAB6AP20340 208 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 PMS1P54277 932 aaKnown RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 SLC10A6Q3KNW5 377 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 SV2CQ496J9 727 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 C16orf86Q6ZW13 317 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 AGGF1Q8N302 714 aaeCLIP7.12□□□□□ -1.271e-6■■■□□ 15.3
TCF4-220ENST00000563824 ZSWIM2Q8NEG5 633 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 PNISRQ8TF01 805 aaKnown RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 RTF1Q92541 710 aaKnown RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 SHISA4Q96DD7 197 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 FEZ1Q99689 392 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 GDF15Q99988 308 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 SPC25Q9HBM1 224 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 SUCOQ9UBS9 1254 aaKnown RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 POLLQ9UGP5 575 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 ANGEL1Q9UNK9 670 aaKnown RBP7.12□□□□□ -1.27
TCF4-220ENST00000563824 ACTL7BQ9Y614 415 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 LAMB2P55268 1798 aa7.12□□□□□ -1.27
TCF4-220ENST00000563824 SCN9AQ15858 1988 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 UNC80Q8N2C7 3258 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 FAM205AQ6ZU69 1335 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 SH3TC1Q8TE82 1336 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 FARP2O94887 1054 aaPredicted RBP7.11□□□□□ -1.27
TCF4-220ENST00000563824 ASMTLO95671 621 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 IREB2P48200 963 aaKnown RBP7.11□□□□□ -1.27
TCF4-220ENST00000563824 UBXN2AP68543 259 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 IGBP1P78318 339 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 SUPT20HL1Q3ZLR7 823 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 CCDC144CPQ8IYA2 1237 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 SMYD4Q8IYR2 804 aaPredicted RBP7.11□□□□□ -1.27
TCF4-220ENST00000563824 BAHD1Q8TBE0 780 aaPredicted RBP7.11□□□□□ -1.27
TCF4-220ENST00000563824 TBC1D16Q8TBP0 767 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 SPATA9Q9BWV2 254 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 FOXQ1Q9C009 403 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 MKRN2Q9H000 416 aaKnown RBP7.11□□□□□ -1.27
TCF4-220ENST00000563824 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.11□□□□□ -1.27
TCF4-220ENST00000563824 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
TCF4-220ENST00000563824 LRP2BPQ9P2M1 347 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 STAP2Q9UGK3 403 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 KNSTRNQ9Y448 316 aa7.11□□□□□ -1.27
TCF4-220ENST00000563824 WNT10BO00744 389 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 UBOX5O94941 541 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 TIAF1O95411 115 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 CST3P01034 146 aaPredicted RBP7.1□□□□□ -1.27
TCF4-220ENST00000563824 ZNF143P52747 638 aaPredicted RBP7.1□□□□□ -1.27
TCF4-220ENST00000563824 ANAPC15P60006 121 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 SNRPNP63162 240 aaKnown RBP7.1□□□□□ -1.27
TCF4-220ENST00000563824 SLBPQ14493 270 aaKnown RBP eCLIP7.1□□□□□ -1.27
TCF4-220ENST00000563824 SF3B3Q15393 1217 aaKnown RBP7.1□□□□□ -1.27
TCF4-220ENST00000563824 TAF7Q15545 349 aaPredicted RBP7.1□□□□□ -1.27
TCF4-220ENST00000563824 TCEA2Q15560 299 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 TMEM67Q5HYA8 995 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 HEATR6Q6AI08 1181 aaKnown RBP7.1□□□□□ -1.27
TCF4-220ENST00000563824 UBE3DQ7Z6J8 389 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 SLC51AQ86UW1 340 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 PPFIBP1Q86W92 1011 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 TMEM192Q8IY95 271 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 TDHQ8IZJ6 230 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 GPATCH3Q96I76 525 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 PANK3Q9H999 370 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 FAM105AQ9NUU6 356 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 TTC28Q96AY4 2481 aa7.1□□□□□ -1.27
TCF4-220ENST00000563824 ANKRD34BA5PLL1 514 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.09□□□□□ -1.27
TCF4-220ENST00000563824 TLR2O60603 784 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 LRIG2O94898 1065 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 CAP2P40123 477 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 USP11P51784 963 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 GTF2A2P52657 109 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 GPSM2P81274 684 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 LACTBP83111 547 aaPredicted RBP7.09□□□□□ -1.27
TCF4-220ENST00000563824 NBPF9Q3BBW0 867 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 PRAMEF18Q5VWM3 479 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 TTLL7Q6ZT98 887 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 ARMCX6Q7L4S7 300 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 C2CD4AQ8NCU7 369 aaPredicted RBP7.09□□□□□ -1.27
TCF4-220ENST00000563824 ZNF512BQ96KM6 892 aaPredicted RBP7.09□□□□□ -1.27
TCF4-220ENST00000563824 HAUS7Q99871 368 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 CEP41Q9BYV8 373 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 GBP3Q9H0R5 595 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 IFT57Q9NWB7 429 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 PCOLCE2Q9UKZ9 415 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 SUGT1Q9Y2Z0 365 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 DAGLAQ9Y4D2 1042 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 COL4A3BPQ9Y5P4 624 aa7.09□□□□□ -1.27
TCF4-220ENST00000563824 LAMA3Q16787 3333 aa7.08□□□□□ -1.28
TCF4-220ENST00000563824 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.08□□□□□ -1.28
TCF4-220ENST00000563824 C9IYK1 514 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms